RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 CD163L1Q9NR16 1453 aa5.63□□□□□ -1.51
PTPRM-215ENST00000583289 CDC42BPGQ6DT37 1551 aa5.63□□□□□ -1.51
PTPRM-215ENST00000583289 TSPOAP1O95153 1857 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 TRBV23OR9-2A0A075B6M9 112 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 OTOL1A6NHN0 477 aaPredicted RBP5.62□□□□□ -1.51
PTPRM-215ENST00000583289 IGHDP01880 384 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 FBLN1P23142 703 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 EXOSC9Q06265 439 aaKnown RBP5.62□□□□□ -1.51
PTPRM-215ENST00000583289 GRB10Q13322 594 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 ADCY4Q8NFM4 1077 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 GCC1Q96CN9 775 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 API5Q9BZZ5 524 aaKnown RBP5.62□□□□□ -1.51
PTPRM-215ENST00000583289 FAN1Q9Y2M0 1017 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 KIF24Q5T7B8 1368 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 PLEKHG1Q9ULL1 1385 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 COL3A1P02461 1466 aaPredicted RBP5.62□□□□□ -1.51
PTPRM-215ENST00000583289 KNDC1Q76NI1 1749 aa5.62□□□□□ -1.51
PTPRM-215ENST00000583289 MAP2P11137 1827 aaKnown RBP5.62□□□□□ -1.51
PTPRM-215ENST00000583289 A0A1W2PQH9 124 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 F8W031 263 aaPredicted RBP5.61□□□□□ -1.51
PTPRM-215ENST00000583289 EPHX1P07099 455 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 GLI4P10075 376 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 TACR1P25103 407 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 PRKAR2BP31323 418 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 IL13P35225 146 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 GJA8P48165 433 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 RGS3P49796 1198 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 SEPHS1P49903 392 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 SOS1Q07889 1333 aaPredicted RBP5.61□□□□□ -1.51
PTPRM-215ENST00000583289 VMACQ2NL98 169 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 TTC21BQ7Z4L5 1316 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 ADAT2Q7Z6V5 191 aaKnown RBP5.61□□□□□ -1.51
PTPRM-215ENST00000583289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPRM-215ENST00000583289 TTC21AQ8NDW8 1320 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 SSH1Q8WYL5 1049 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 RCC1LQ96I51 464 aaKnown RBP5.61□□□□□ -1.51
PTPRM-215ENST00000583289 CDK12Q9NYV4 1490 aaPredicted RBP5.61□□□□□ -1.51
PTPRM-215ENST00000583289 CGGBP1Q9UFW8 167 aaPredicted RBP5.61□□□□□ -1.51
PTPRM-215ENST00000583289 NUDT5Q9UKK9 219 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 BACE2Q9Y5Z0 518 aa5.61□□□□□ -1.51
PTPRM-215ENST00000583289 PIK3R4Q99570 1358 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 ZC3H12DA2A288 527 aaKnown RBP5.6□□□□□ -1.51
PTPRM-215ENST00000583289 STXBP3O00186 592 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 HTATSF1O43719 755 aaKnown RBP5.6□□□□□ -1.51
PTPRM-215ENST00000583289 NCAM1P13591 858 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 PRR5P85299 388 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 AMPD2Q01433 879 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 FRMD5Q7Z6J6 570 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 NT5DC4Q86YG4 428 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 ITPRIPQ8IWB1 547 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 SMC5Q8IY18 1101 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 ARHGEF39Q8N4T4 335 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 CRACR2BQ8N4Y2 399 aaPredicted RBP5.6□□□□□ -1.51
PTPRM-215ENST00000583289 LZTR1Q8N653 840 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 FEZF2Q8TBJ5 459 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 KLHL6Q8WZ60 621 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 TSPAN17Q96FV3 270 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 TEPSINQ96N21 525 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 ZBTB40Q9NUA8 1239 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 STRIP2Q9ULQ0 834 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 NOB1Q9ULX3 412 aaKnown RBP5.6□□□□□ -1.51
PTPRM-215ENST00000583289 PCDHB10Q9UN67 800 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.6□□□□□ -1.51
PTPRM-215ENST00000583289 SUGT1Q9Y2Z0 365 aa5.6□□□□□ -1.51
PTPRM-215ENST00000583289 CPS1P31327 1500 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 METP08581 1390 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 C2orf71A6NGG8 1288 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 FFAR3O14843 346 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 VAMP4O75379 141 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 ZNF853P0CG23 659 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 TRIM27P14373 513 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 PAMP19021 973 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 LIMS1P48059 325 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 CASP7P55210 303 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 SLC9A5Q14940 896 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 PPP2R5EQ16537 467 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 NETO2Q8NC67 525 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 CPLX3Q8WVH0 158 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 SHDQ96IW2 340 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 SEC16BQ96JE7 1060 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 MCMBPQ9BTE3 642 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 BABAM1Q9NWV8 329 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 HCFC2Q9Y5Z7 792 aa5.59□□□□□ -1.51
PTPRM-215ENST00000583289 SETD1AO15047 1707 aaKnown RBP5.59□□□□□ -1.51
PTPRM-215ENST00000583289 KIAA0232Q92628 1395 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 KIF13AQ9H1H9 1805 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 ITSN1Q15811 1721 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 NPHP3-ACAD11A0A0J9YXS1 232 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 ANKRD34BA5PLL1 514 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 NAT2P11245 290 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 DEKP35659 375 aaKnown RBP5.58□□□□□ -1.52
PTPRM-215ENST00000583289 KCNC1P48547 511 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 NASPP49321 788 aaPredicted RBP5.58□□□□□ -1.52
PTPRM-215ENST00000583289 FOXO4P98177 505 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 HDLBPQ00341 1268 aaKnown RBP5.58□□□□□ -1.52
PTPRM-215ENST00000583289 DPY19L1Q2PZI1 675 aa5.58□□□□□ -1.52
PTPRM-215ENST00000583289 TWISTNBQ3B726 338 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms