RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FECHP22830 423 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 HMGCS2P54868 508 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 FKBP15Q5T1M5 1219 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 LRCH2Q5VUJ6 765 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 POTEGQ6S5H5 508 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 POTEEQ6S8J3 1075 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 TMTC1Q8IUR5 882 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 SYT2Q8N9I0 419 aaPredicted RBP25.15■■□□□ 1.62
CCDC47-204ENST00000582252 RETREG2Q8NC44 543 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 ZNF507Q8TCN5 953 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 TBC1D5Q92609 795 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 SLC5A5Q92911 643 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 CLMNQ96JQ2 1002 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 WDR11Q9BZH6 1224 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 TANGO6Q9C0B7 1094 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 PPP2R5CQ13362 524 aa25.14■■□□□ 1.61
CCDC47-204ENST00000582252 SH3D19Q5HYK7 790 aa25.14■■□□□ 1.61
CCDC47-204ENST00000582252 EIF2AK1Q9BQI3 630 aaKnown RBP25.14■■□□□ 1.61
CCDC47-204ENST00000582252 NOC4LQ9BVI4 516 aaKnown RBP25.14■■□□□ 1.61
CCDC47-204ENST00000582252 FRMD3A2A2Y4 597 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 CCDC175P0C221 793 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 SPATA31C1P0DKV0 1188 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 FXR1P51114 621 aaKnown RBP eCLIP25.13■■□□□ 1.61
CCDC47-204ENST00000582252 GHRHRQ02643 423 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 TSR1Q2NL82 804 aaKnown RBP25.13■■□□□ 1.61
CCDC47-204ENST00000582252 REXO1L1PQ8IX06 675 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 SLC38A10Q9HBR0 1119 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 ABHD10Q9NUJ1 306 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 LOXHD1Q8IVV2 1947 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 ZNF536O15090 1300 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 PHLPP2Q6ZVD8 1323 aa25.13■■□□□ 1.61
CCDC47-204ENST00000582252 ZBED4O75132 1171 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 ETF1P62495 437 aaKnown RBP25.12■■□□□ 1.61
CCDC47-204ENST00000582252 HERC4Q5GLZ8 1057 aaPredicted RBP25.12■■□□□ 1.61
CCDC47-204ENST00000582252 CYP2W1Q8TAV3 490 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 AGBL1Q96MI9 1066 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 RPAP3Q9H6T3 665 aaPredicted RBP25.12■■□□□ 1.61
CCDC47-204ENST00000582252 GBA2Q9HCG7 927 aaPredicted RBP25.12■■□□□ 1.61
CCDC47-204ENST00000582252 PPP1R9AQ9ULJ8 1098 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 RLFQ13129 1914 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 B4DLN1 442 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 GAS7O60861 476 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 PSMD10O75832 226 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 FLOT1O75955 427 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 EYA4O95677 639 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 TBC1D8BQ0IIM8 1120 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 PPIL2Q13356 520 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 DGKZQ13574 1117 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 CYP26C1Q6V0L0 522 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 OTOP1Q7RTM1 612 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 OTUD5Q96G74 571 aa25.12■■□□□ 1.61
CCDC47-204ENST00000582252 GPBP1L1Q9HC44 474 aaPredicted RBP25.12■■□□□ 1.61
CCDC47-204ENST00000582252 CELF2O95319 508 aaKnown RBP25.11■■□□□ 1.61
CCDC47-204ENST00000582252 KRT9P35527 623 aa25.11■■□□□ 1.61
CCDC47-204ENST00000582252 NIPA1Q7RTP0 329 aa25.11■■□□□ 1.61
CCDC47-204ENST00000582252 C2orf69Q8N8R5 385 aa25.11■■□□□ 1.61
CCDC47-204ENST00000582252 CNKSR2Q8WXI2 1034 aa25.11■■□□□ 1.61
CCDC47-204ENST00000582252 TEKT3Q9BXF9 490 aa25.11■■□□□ 1.61
CCDC47-204ENST00000582252 LUC7L2Q9Y383 392 aaKnown RBP25.11■■□□□ 1.61
CCDC47-204ENST00000582252 MEIS1O00470 390 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 CXCL11O14625 94 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 FKBP3Q00688 224 aaKnown RBP25.1■■□□□ 1.61
CCDC47-204ENST00000582252 MAN2A1Q16706 1144 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 PPP4R3CPQ6ZMV5 832 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 CEP63Q96MT8 703 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 MXRA8Q9BRK3 442 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 ZNF577Q9BSK1 485 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 CAPN11Q9UMQ6 739 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 RPTORQ8N122 1335 aa25.1■■□□□ 1.61
CCDC47-204ENST00000582252 GNA14O95837 355 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 ITGBL1O95965 494 aaPredicted RBP25.09■■□□□ 1.61
CCDC47-204ENST00000582252 BCRP11274 1271 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 PABPC4Q13310 644 aaKnown RBP eCLIP25.09■■□□□ 1.61
CCDC47-204ENST00000582252 SYT10Q6XYQ8 523 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 TOGARAM2Q6ZUX3 1019 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 NEK9Q8TD19 979 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 ERGIC2Q96RQ1 377 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 KCNH4Q9UQ05 1017 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 SOWAHDA6NJG2 315 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 IRF6O14896 467 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 ALAS1P13196 640 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 LRRC41Q15345 812 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 ARSHQ5FYA8 562 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 FIGNQ5HY92 759 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 OR8K1Q8NGG5 319 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 CLEC4DQ8WXI8 215 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 OPTNQ96CV9 577 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 SLC10A4Q96EP9 437 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 RIT2Q99578 217 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 PCDHA2Q9Y5H9 948 aa25.09■■□□□ 1.61
CCDC47-204ENST00000582252 COL11A1P12107 1806 aaPredicted RBP25.08■■□□□ 1.61
CCDC47-204ENST00000582252 CTIFO43310 598 aaKnown RBP25.08■■□□□ 1.61
CCDC47-204ENST00000582252 UBXN2AP68543 259 aa25.08■■□□□ 1.61
CCDC47-204ENST00000582252 GIT2Q14161 759 aa25.08■■□□□ 1.61
CCDC47-204ENST00000582252 SYCP1Q15431 976 aa25.08■■□□□ 1.61
CCDC47-204ENST00000582252 VWA3BQ502W6 1294 aa25.08■■□□□ 1.61
CCDC47-204ENST00000582252 CPXCR1Q8N123 301 aa25.08■■□□□ 1.61
CCDC47-204ENST00000582252 PCMTD1Q96MG8 357 aaPredicted RBP25.08■■□□□ 1.61
CCDC47-204ENST00000582252 ZHX3Q9H4I2 956 aa25.08■■□□□ 1.61
CCDC47-204ENST00000582252 A0A0G2JLL6 359 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms