RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 ARHGAP23Q9P227 1491 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SLC12A2P55011 1212 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
MSI2-209ENST00000579483 PLCB4Q15147 1175 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SPATA1Q5VX52 437 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 IER5Q5VY09 327 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 RINT1Q6NUQ1 792 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 PGBD1Q96JS3 809 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 TIPINQ9BVW5 301 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SMARCAD1Q9H4L7 1026 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 STK25O00506 426 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 CLDN3O15551 220 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SEC24BO95487 1268 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 TFRCP02786 760 aaKnown RBP11.13□□□□□ -0.63
MSI2-209ENST00000579483 C6orf222P0C671 652 aaPredicted RBP11.13□□□□□ -0.63
MSI2-209ENST00000579483 CYP2B6P20813 491 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 CPT1AP50416 773 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 EFNA5P52803 228 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 PNOCQ13519 176 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 RPS6KA1Q15418 735 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 ARFGAP2Q8N6H7 521 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 OR8K1Q8NGG5 319 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SCFD2Q8WU76 684 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 FAM149B1Q96BN6 582 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 MYO1AQ9UBC5 1043 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SEL1LQ9UBV2 794 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 AMFRQ9UKV5 643 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 TTLL3Q9Y4R7 772 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 PCDHA10Q9Y5I2 948 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.13□□□□□ -0.63
MSI2-209ENST00000579483 GPR75-ASB3A0A0A6YYF3 556 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 XRCC6P12956 609 aaKnown RBP eCLIP11.13□□□□□ -0.63
MSI2-209ENST00000579483 NDUFAF2Q8N183 169 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SAMD3Q8N6K7 520 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 MTMR4Q9NYA4 1195 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 SLC9A2Q9UBY0 812 aa11.13□□□□□ -0.63
MSI2-209ENST00000579483 THAP12O43422 761 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 PRPSAP1Q14558 356 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 U2AF1L4Q8WU68 220 aaKnown RBP11.12□□□□□ -0.63
MSI2-209ENST00000579483 PRIMPOLQ96LW4 560 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 MXD3Q9BW11 206 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 NLRC4Q9NPP4 1024 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 UTP11Q9Y3A2 253 aaKnown RBP11.12□□□□□ -0.63
MSI2-209ENST00000579483 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 ARHGAP6O43182 974 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 HUS1O60921 280 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 AFPP02771 609 aaKnown RBP11.12□□□□□ -0.63
MSI2-209ENST00000579483 SLFN14P0C7P3 912 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 EEF1GP26641 437 aaKnown RBP11.12□□□□□ -0.63
MSI2-209ENST00000579483 INHBEP58166 350 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 VEPH1Q14D04 833 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 NECTIN1Q15223 517 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 EFCAB13Q8IY85 973 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
MSI2-209ENST00000579483 EIF3CLB5ME19 914 aaKnown RBP11.12□□□□□ -0.63
MSI2-209ENST00000579483 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 ADGRF4Q8IZF3 695 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 SLC44A5Q8NCS7 719 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 EIF3CQ99613 913 aaKnown RBP11.12□□□□□ -0.63
MSI2-209ENST00000579483 TTC1Q99614 292 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 SPZ1Q9BXG8 430 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 MROH8Q9H579 483 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 PCDHA7Q9UN72 937 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 HOXC6P09630 235 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 ADCK5Q3MIX3 580 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 GRK7Q8WTQ7 553 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 RSAD2Q8WXG1 361 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 DPF2Q92785 391 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
MSI2-209ENST00000579483 MXI1P50539 228 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 PPP4CP60510 307 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 ZNF667Q5HYK9 610 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 NAPGQ99747 312 aaPredicted RBP11.11□□□□□ -0.63
MSI2-209ENST00000579483 SRPRBQ9Y5M8 271 aaKnown RBP11.11□□□□□ -0.63
MSI2-209ENST00000579483 IPO5O00410 1097 aaKnown RBP11.11□□□□□ -0.63
MSI2-209ENST00000579483 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
MSI2-209ENST00000579483 ARL13BQ3SXY8 428 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 CFAP157Q5JU67 520 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 CCDC25Q86WR0 208 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 SEPT1Q8WYJ6 367 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 FAM107BQ9H098 131 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 BHMT2Q9H2M3 363 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 ARFGAP3Q9NP61 516 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 INPP5FQ9Y2H2 1132 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 H2AFZP0C0S5 128 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 SNAP25P60880 206 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 BFSP1Q12934 665 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 H2AFVQ71UI9 128 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 TRIM62Q9BVG3 475 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 MRPL4Q9BYD3 311 aaKnown RBP11.11□□□□□ -0.63
MSI2-209ENST00000579483 JPH1Q9HDC5 661 aaPredicted RBP11.11□□□□□ -0.63
MSI2-209ENST00000579483 ASIC3Q9UHC3 531 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms