RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DHX32Q7L7V1 743 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 CHST3Q7LGC8 479 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 ANKRD23Q86SG2 305 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 DGKHQ86XP1 1220 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 LRRC47Q8N1G4 583 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 IL22RA1Q8N6P7 574 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 TOX2Q96NM4 488 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 TMEM47Q9BQJ4 181 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 ZKSCAN3Q9BRR0 538 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 MTA3Q9BTC8 594 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 TM6SF1Q9BZW5 370 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 KCNF1Q9H3M0 494 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 RNF41Q9H4P4 317 aaPredicted RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 CNNM2Q9H8M5 875 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 RNF186Q9NXI6 227 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 BRPF3Q9ULD4 1205 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 AGTPBP1Q9UPW5 1226 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 SLC45A1Q9Y2W3 748 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 BRCA2P51587 3418 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF536O15090 1300 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 ARID2Q68CP9 1835 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 TSPY2A6NKD2 308 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 F5H6K3 240 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 PDHXO00330 501 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 WDR46O15213 610 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 PRC1O43663 620 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 RANBP6O60518 1105 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 PEX10O60683 326 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 PLA2G6O60733 806 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 TTLL1O95922 423 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 IGHA2P01877 340 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 SLC3A2P08195 630 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 TSPY3P0CV98 308 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 TSPY8P0CW00 308 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 HSPA8P11142 646 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 PDHBP11177 359 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 TOP1P11387 765 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 CETPP11597 493 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 RPS6KB1P23443 525 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 LIFRP42702 1097 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 GTF2A2P52657 109 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 INHBEP58166 350 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ANAPC15P60006 121 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 KLRC3Q07444 240 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF543Q08ER8 600 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 CRHR2Q13324 411 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 RAB3GAP1Q15042 981 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 NOM1Q5C9Z4 860 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L2Q6R6M4 530 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 C17orf99Q6UX52 265 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 BTNL9Q6UXG8 535 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 CATSPERGQ6ZRH7 1159 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ACAD11Q709F0 780 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 SGMS1Q86VZ5 419 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 AMOTL1Q8IY63 956 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF444Q8N0Y2 327 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 BHLHE22Q8NFJ8 381 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 NCOA7Q8NI08 942 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ZSCAN18Q8TBC5 510 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 LPAR1Q92633 364 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ESR2Q92731 530 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 MTMR8Q96EF0 704 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 TCEANC2Q96MN5 208 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 TBC1D32Q96NH3 1257 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 NEK1Q96PY6 1258 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 NUP88Q99567 741 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 KRT23Q9C075 422 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 PHACTR1Q9C0D0 580 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ASCC2Q9H1I8 757 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ALDH8A1Q9H2A2 487 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 MKNK2Q9HBH9 465 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 AS3MTQ9HBK9 375 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 TXNRD2Q9NNW7 524 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 PICK1Q9NRD5 415 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 FBXO28Q9NVF7 368 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 SAGE1Q9NXZ1 904 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 RBPJLQ9UBG7 517 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 MORF4L1Q9UBU8 362 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 CLIP2Q9UDT6 1046 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 RAPGEFL1Q9UHV5 662 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF214Q9UL59 606 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 MYPNQ86TC9 1320 aa4.45□□□□□ -1.7
SMARCE1-215ENST00000578995 PALM3A6NDB9 673 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 MPHOSPH10O00566 681 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 FOXN1O15353 648 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 CA12O43570 354 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 CYTH3O43739 400 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 TLR2O60603 784 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 PPP1R11O60927 126 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 LARGE1O95461 756 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 CYP2C8P10632 490 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 EIF2AK2P19525 551 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 EPHA4P54764 986 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 PSMA6P60900 246 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 HERVK_113P62684 666 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 MLLT1Q03111 559 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 SREBF2Q12772 1141 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 GRM4Q14833 912 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 ZYXQ15942 572 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms