RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 BIRC2Q13490 618 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 EDEM3Q9BZQ6 932 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 SLITRK6Q9H5Y7 841 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 USH1CQ9Y6N9 552 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 CASQ2O14958 399 aaPredicted RBP14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 PFDN1O60925 122 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 UFL1O94874 794 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 GNPTABQ3T906 1256 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 PDXDC1Q6P996 788 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 RAB20Q9NX57 234 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 PPP1R9AQ9ULJ8 1098 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 DIS3Q9Y2L1 958 aaKnown RBP14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 ERBB3P21860 1342 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 PHF20L1A8MW92 1017 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 MAP2K7O14733 419 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 FOXO4P98177 505 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 MAP3K21Q5TCX8 1036 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 LRIG3Q6UXM1 1119 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 RNF168Q8IYW5 571 aaPredicted RBP14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 ECT2Q9H8V3 914 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 AMACRQ9UHK6 382 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 ALKQ9UM73 1620 aa14.21□□□□□ -0.13
PCDHGB3-201ENST00000576222 PPP1R3GB7ZBB8 358 aa14.21□□□□□ -0.14
PCDHGB3-201ENST00000576222 DDX39AO00148 427 aaKnown RBP14.21□□□□□ -0.14
PCDHGB3-201ENST00000576222 FAM47EQ6ZV65 393 aa14.21□□□□□ -0.14
PCDHGB3-201ENST00000576222 ZNF653Q96CK0 615 aa14.21□□□□□ -0.14
PCDHGB3-201ENST00000576222 SGSM3Q96HU1 749 aa14.21□□□□□ -0.14
PCDHGB3-201ENST00000576222 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 TXNRD1Q16881 649 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 PIGSQ96S52 555 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 ETNK1Q9HBU6 452 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 DNAJC17Q9NVM6 304 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 NOC2LQ9Y3T9 749 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 RIMBP2O15034 1052 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 ATP5HO75947 161 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 CFBP00751 764 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 PDHA1P08559 390 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 GCFC2P16383 781 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 TMOD1P28289 359 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 IRX1P78414 480 aaPredicted RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 GUF1Q8N442 669 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 ARL8AQ96BM9 186 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 RABGAP1Q9Y3P9 1069 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 KIAA1210Q9ULL0 1709 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 MYO3AQ8NEV4 1616 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 EIF4E1BA6NMX2 242 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 MAP3K7O43318 606 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 GAS7O60861 476 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 PLA2G4BP0C869 781 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 FCER1AP12319 257 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 COG7P83436 770 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 BYSLQ13895 437 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 RSAD2Q8WXG1 361 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 KIFC2Q96AC6 838 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 TUBB6Q9BUF5 446 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 MLXIPLQ9NP71 852 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 HARSP12081 509 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 CA4P22748 312 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 TMC4Q7Z404 712 aa14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 RPUSD2Q8IZ73 545 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 DDX23Q9BUQ8 820 aaKnown RBP14.2□□□□□ -0.14
PCDHGB3-201ENST00000576222 LMNB2Q03252 620 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 TRIP13Q15645 432 aaPredicted RBP14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 OR2W6PQ8NHA6 318 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 VTI1AQ96AJ9 217 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 SH3GL3Q99963 347 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 CARD10Q9BWT7 1032 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 EXOC1LA0A1B0GW35 172 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 DIAPH2O60879 1101 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 DCTN3O75935 186 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 BFSP1Q12934 665 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 CCDC14Q49A88 953 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 DGKHQ86XP1 1220 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 DDX17Q92841 729 aaKnown RBP14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 IWS1Q96ST2 819 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 SSU72P8A0A1W2PR75 194 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 MSH2P43246 934 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 KCNH2Q12809 1159 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 RCN2Q14257 317 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 PSMD6Q15008 389 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 PAPD7Q5XG87 772 aaKnown RBP14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 RHOT2Q8IXI1 618 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 MYCBPAPQ8TBZ2 947 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 CFAP57Q96MR6 1250 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 Q9H521 79 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 STOML1Q9UBI4 398 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 SP4Q02446 784 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 LRRC14Q15048 493 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 ODR4Q5SWX8 454 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 KAZNQ674X7 775 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 KDM7AQ6ZMT4 941 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 CCDC127Q96BQ5 260 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 COA7Q96BR5 231 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms