RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 DDX25Q9UHL0 483 aaKnown RBP20.21■□□□□ 0.83
CLDN7-208ENST00000575313 TCEAL9Q9UHQ7 104 aa20.21■□□□□ 0.83
CLDN7-208ENST00000575313 DCDC2CA8MYV0 355 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 MSH4O15457 936 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 CCNT1O60563 726 aaKnown RBP20.2■□□□□ 0.82
CLDN7-208ENST00000575313 ZNF286BP0CG31 522 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 ATP2B1P20020 1258 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 TOB1P50616 345 aaPredicted RBP20.2■□□□□ 0.82
CLDN7-208ENST00000575313 TLE2Q04725 743 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 RILPL1Q5EBL4 403 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 NFRKBQ6P4R8 1299 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 KAT2BQ92831 832 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 TNPO1Q92973 898 aaKnown RBP20.2■□□□□ 0.82
CLDN7-208ENST00000575313 RIT2Q99578 217 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 GRIN2DO15399 1336 aa20.2■□□□□ 0.82
CLDN7-208ENST00000575313 TLR3O15455 904 aaKnown RBP20.19■□□□□ 0.82
CLDN7-208ENST00000575313 DHX15O43143 795 aaKnown RBP20.19■□□□□ 0.82
CLDN7-208ENST00000575313 PQBP1O60828 265 aaKnown RBP20.19■□□□□ 0.82
CLDN7-208ENST00000575313 LGALS2P05162 132 aa20.19■□□□□ 0.82
CLDN7-208ENST00000575313 TCF7P36402 384 aaPredicted RBP20.19■□□□□ 0.82
CLDN7-208ENST00000575313 TRAPPC10P48553 1259 aa20.19■□□□□ 0.82
CLDN7-208ENST00000575313 PTPN11Q06124 597 aaPredicted RBP20.19■□□□□ 0.82
CLDN7-208ENST00000575313 NBPF20Q3BBV1 942 aa20.19■□□□□ 0.82
CLDN7-208ENST00000575313 SLC5A5Q92911 643 aa20.19■□□□□ 0.82
CLDN7-208ENST00000575313 ZNF396Q96N95 335 aaPredicted RBP20.19■□□□□ 0.82
CLDN7-208ENST00000575313 C16orf70Q9BSU1 422 aa20.19■□□□□ 0.82
CLDN7-208ENST00000575313 ZNF215Q9UL58 517 aaPredicted RBP20.19■□□□□ 0.82
CLDN7-208ENST00000575313 ALPK3Q96L96 1907 aa20.19■□□□□ 0.82
CLDN7-208ENST00000575313 SCN10AQ9Y5Y9 1956 aa20.19■□□□□ 0.82
CLDN7-208ENST00000575313 GSTTP1A0A1W2PQM5 241 aa20.18■□□□□ 0.82
CLDN7-208ENST00000575313 H3BRB1 525 aa20.18■□□□□ 0.82
CLDN7-208ENST00000575313 PSEN2P49810 448 aa20.18■□□□□ 0.82
CLDN7-208ENST00000575313 ACTR2P61160 394 aa20.18■□□□□ 0.82
CLDN7-208ENST00000575313 KRT76Q01546 638 aa20.18■□□□□ 0.82
CLDN7-208ENST00000575313 DNM1Q05193 864 aaKnown RBP20.18■□□□□ 0.82
CLDN7-208ENST00000575313 MFSD10Q14728 455 aa20.18■□□□□ 0.82
CLDN7-208ENST00000575313 ZNF746Q6NUN9 644 aaPredicted RBP20.18■□□□□ 0.82
CLDN7-208ENST00000575313 TUT1Q9H6E5 874 aaKnown RBP20.18■□□□□ 0.82
CLDN7-208ENST00000575313 DOCK5Q9H7D0 1870 aa20.18■□□□□ 0.82
CLDN7-208ENST00000575313 PDE4DIPQ5VU43 2346 aa20.18■□□□□ 0.82
CLDN7-208ENST00000575313 DDX39AO00148 427 aaKnown RBP20.17■□□□□ 0.82
CLDN7-208ENST00000575313 HAS3O00219 553 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 WNT7AO00755 349 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 TBX3O15119 743 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 SLC37A4O43826 429 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 GAS7O60861 476 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 CHMP4BP1P59074 171 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 NBR1Q14596 966 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 KIAA0753Q2KHM9 967 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 FAM47CQ5HY64 1035 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 TTC38Q5R3I4 469 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 UTP14CQ5TAP6 766 aaKnown RBP20.17■□□□□ 0.82
CLDN7-208ENST00000575313 LRCH2Q5VUJ6 765 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 SESTD1Q86VW0 696 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 FAM126BQ8IXS8 530 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 SMAP1Q8IYB5 467 aaPredicted RBP20.17■□□□□ 0.82
CLDN7-208ENST00000575313 ETNPPLQ8TBG4 499 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 CHAMP1Q96JM3 812 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 FAM20AQ96MK3 541 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 TFIP11Q9UBB9 837 aaKnown RBP20.17■□□□□ 0.82
CLDN7-208ENST00000575313 PRKAG2Q9UGJ0 569 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 TELO2Q9Y4R8 837 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 PCDHB6Q9Y5E3 794 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 EMSYQ7Z589 1322 aa20.17■□□□□ 0.82
CLDN7-208ENST00000575313 ATG7O95352 703 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 CCNE2O96020 404 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 CLTBP09497 229 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 ZNF174Q15697 407 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 ATL3Q6DD88 541 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 C7orf31Q8N865 590 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 UIMC1Q96RL1 719 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 USP28Q96RU2 1077 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 TEKT3Q9BXF9 490 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 SMARCAD1Q9H4L7 1026 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 AZI2Q9H6S1 392 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 KCNMB3Q9NPA1 279 aa20.16■□□□□ 0.82
CLDN7-208ENST00000575313 LGR5O75473 907 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 SUPT20HL2P0C7V6 817 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 CEBPZQ03701 1054 aaKnown RBP20.15■□□□□ 0.82
CLDN7-208ENST00000575313 FAAP100Q0VG06 881 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 ORC2Q13416 577 aaPredicted RBP20.15■□□□□ 0.82
CLDN7-208ENST00000575313 MIS18BP1Q6P0N0 1132 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 SLFN12Q8IYM2 578 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 GLG1Q92896 1179 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 FTOQ9C0B1 505 aaKnown RBP eCLIP20.15■□□□□ 0.82
CLDN7-208ENST00000575313 PDLIM7Q9NR12 457 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.15■□□□□ 0.82
CLDN7-208ENST00000575313 ERAP1Q9NZ08 941 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 CLIC4Q9Y696 253 aa20.15■□□□□ 0.82
CLDN7-208ENST00000575313 WDR64B1ANS9 1081 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 MARCH6O60337 910 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 NEMFO60524 1076 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 PSMD10O75832 226 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 BAG4O95429 457 aaKnown RBP20.14■□□□□ 0.81
CLDN7-208ENST00000575313 CD4P01730 458 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 NCLP19338 710 aaKnown RBP20.14■□□□□ 0.81
CLDN7-208ENST00000575313 MCM7P33993 719 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 SLC26A2P50443 739 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 KRT85P78386 507 aa20.14■□□□□ 0.81
CLDN7-208ENST00000575313 SF3A1Q15459 793 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms