RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 GADL1Q6ZQY3 521 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 MOB2Q70IA6 237 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 FILIP1Q7Z7B0 1213 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 LRRC8AQ8IWT6 810 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 GUF1Q8N442 669 aaKnown RBP6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 MB21D1Q8N884 522 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 KIAA0895Q8NCT3 520 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 CCDC150Q8NCX0 1101 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 CHST13Q8NET6 341 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 KIAA1524Q8TCG1 905 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 CACTINQ8WUQ7 758 aaKnown RBP6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 OTUD5Q96G74 571 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 DYDC2Q96IM9 177 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 ZFP91Q96JP5 570 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 CLMNQ96JQ2 1002 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 RMDN3Q96TC7 470 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 DUSP9Q99956 384 aaKnown RBP6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 UNC45AQ9H3U1 944 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 THAP9Q9H5L6 903 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 AGO4Q9HCK5 861 aaKnown RBP6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 SLC39A2Q9NP94 309 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 KCNH7Q9NS40 1196 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 PANK4Q9NVE7 773 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 INTS13Q9NVM9 706 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 ADD3Q9UEY8 706 aaKnown RBP6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 MAPK8IP1Q9UQF2 711 aa6.84□□□□□ -1.31
TRAPPC1-204ENST00000571947 MYH10P35580 1976 aa6.84□□□□□ -1.32
TRAPPC1-204ENST00000571947 ZSWIM8A7E2V4 1837 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 FRMD3A2A2Y4 597 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 TRIM49BA6NDI0 452 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 KCNJ18B7U540 433 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 MAFGO15525 162 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 DHX15O43143 795 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 COBLO75128 1261 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 STAM2O75886 525 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 KRT18P05783 430 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 NR3C2P08235 984 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 MYCLP12524 364 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 EEF1GP26641 437 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 PBX1P40424 430 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 COPB1P53618 953 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 CCZ1BP86790 482 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 CCZ1P86791 482 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 CYP4A11Q02928 519 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 LRMPQ12912 555 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 TBX2Q13207 712 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 PABPC4Q13310 644 aaKnown RBP eCLIP6.83□□□□□ -1.325e-7■■■□□ 16
TRAPPC1-204ENST00000571947 ITGB3BPQ13352 177 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 MTMR1Q13613 665 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 GIT2Q14161 759 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 CTTNQ14247 550 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 KCNJ12Q14500 433 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 PLS1Q14651 629 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 KRT31Q15323 416 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 TCP11X2Q5H9J9 407 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 FAM26FQ5R3K3 315 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 ANKRD40Q6AI12 368 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 FASTKD5Q7L8L6 764 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 MIER3Q7Z3K6 550 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 NLRX1Q86UT6 975 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 VSIG10LQ86VR7 867 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 IRF2BP1Q8IU81 584 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 RIOX2Q8IUF8 465 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 FAM114A1Q8IWE2 563 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 PIP4P2Q8N4L2 257 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 ANKRD20A12PQ8NF67 263 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 NSUN6Q8TEA1 469 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 HPS3Q969F9 1004 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 GPRASP2Q96D09 838 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 TRIM47Q96LD4 638 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 NACC1Q96RE7 527 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 SRRTQ9BXP5 876 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 SEMA6BQ9H3T3 888 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 A1CFQ9NQ94 594 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 RTN4Q9NQC3 1192 aaKnown RBP6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 TBC1D22BQ9NU19 505 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 CYP39A1Q9NYL5 469 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 RGL1Q9NZL6 768 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 BTBD7Q9P203 1132 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 FBXO40Q9UH90 709 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 PYCARDQ9ULZ3 195 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 AGTPBP1Q9UPW5 1226 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 CLEC11AQ9Y240 323 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 PCDHA2Q9Y5H9 948 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 ZNF236Q9UL36 1845 aa6.83□□□□□ -1.32
TRAPPC1-204ENST00000571947 PFASO15067 1338 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 NPHP3-ACAD11A0A0J9YXS1 232 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 TEX33O43247 280 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 CHMP2AO43633 222 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 CNMDO75829 334 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 KIF20AO95235 890 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 LYPLA2O95372 231 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 FGFR1OPO95684 399 aaKnown RBP6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 P4HBP07237 508 aaKnown RBP6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 GAP43P17677 238 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 OSBPP22059 807 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 COPB2P35606 906 aa6.82□□□□□ -1.32
TRAPPC1-204ENST00000571947 HERVK_113P62684 666 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms