RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 POTECB2RU33 542 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 CEP104O60308 925 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 SLC16A2P36021 539 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 ERVK-9P63128 1117 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 PICALMQ13492 652 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 NAA35Q5VZE5 725 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 POTEBQ6S5H4 581 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 AMIGO3Q86WK7 504 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 GPBP1Q86WP2 473 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 MREGQ8N565 214 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 WHAMMQ8TF30 809 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 CEP63Q96MT8 703 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 EMILIN3Q9NT22 766 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 LEMD3Q9Y2U8 911 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 THRAP3Q9Y2W1 955 aaKnown RBP19.16■□□□□ 0.66
SCARF1-205ENST00000571272 GPR75-ASB3A0A0A6YYF3 556 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 PPP1R11O60927 126 aaPredicted RBP19.16■□□□□ 0.66
SCARF1-205ENST00000571272 PPP1R37O75864 691 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 PLA2G4BP0C869 781 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 SLC9A1P19634 815 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 GUCY2CP25092 1073 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 HNRNPH1P31943 449 aaKnown RBP19.16■□□□□ 0.66
SCARF1-205ENST00000571272 CCDC65Q8IXS2 484 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 MTMR4Q9NYA4 1195 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 AIPL1Q9NZN9 384 aa19.16■□□□□ 0.66
SCARF1-205ENST00000571272 KRT18P05783 430 aaKnown RBP19.15■□□□□ 0.66
SCARF1-205ENST00000571272 PPP4R3AQ6IN85 833 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 ARHGAP27Q6ZUM4 889 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 GANQ9H2C0 597 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 JMJD4Q9H9V9 463 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 PCDHA2Q9Y5H9 948 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 H0YHG0 523 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 RHBDL3P58872 404 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 DDX60LQ5H9U9 1706 aaKnown RBP19.15■□□□□ 0.66
SCARF1-205ENST00000571272 ZNF571Q7Z3V5 609 aaPredicted RBP19.15■□□□□ 0.66
SCARF1-205ENST00000571272 ADGRF4Q8IZF3 695 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 KCTD10Q9H3F6 313 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 TAF1DQ9H5J8 278 aaPredicted RBP19.15■□□□□ 0.66
SCARF1-205ENST00000571272 COL16A1Q07092 1604 aaPredicted RBP19.15■□□□□ 0.66
SCARF1-205ENST00000571272 MYO1FO00160 1098 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 GNA14O95837 355 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 AKR1B1P15121 316 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 MDH1P40925 334 aaKnown RBP19.15■□□□□ 0.66
SCARF1-205ENST00000571272 PTGISQ16647 500 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 KCNV1Q6PIU1 500 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 CD302Q8IX05 232 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 ZNF473Q8WTR7 871 aaKnown RBP19.15■□□□□ 0.66
SCARF1-205ENST00000571272 SPAG5Q96R06 1193 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 CD209Q9NNX6 404 aa19.15■□□□□ 0.66
SCARF1-205ENST00000571272 PPANQ9NQ55 473 aaKnown RBP19.15■□□□□ 0.66
SCARF1-205ENST00000571272 hCG_1984214I3L0E3 225 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 MEFVO15553 781 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 NR2F2P24468 414 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 DPP8Q6V1X1 898 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 SUGP1Q8IWZ8 645 aaKnown RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 ZNF713Q8N859 430 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 CCT8L2Q96SF2 557 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 E7EVH7 732 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 KIF4AO95239 1232 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 STAT3P40763 770 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 CASP5P51878 434 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 HDLBPQ00341 1268 aaKnown RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 ITGB3BPQ13352 177 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 GRAPQ13588 217 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 SEPT2Q15019 361 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 ASPRV1Q53RT3 343 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 MFSD14BQ5SR56 506 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 RNF187Q5TA31 235 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 FOXR2Q6PJQ5 311 aa19.14■□□□□ 0.65
SCARF1-205ENST00000571272 GRAPLQ8TC17 118 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 DDX47Q9H0S4 455 aaKnown RBP19.14■□□□□ 0.65
SCARF1-205ENST00000571272 WNK3Q9BYP7 1800 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 TMCO5BA8MYB1 307 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 HSD17B3P37058 310 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 HSPA9P38646 679 aaKnown RBP19.13■□□□□ 0.65
SCARF1-205ENST00000571272 MNAT1P51948 309 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 SF3B2Q13435 895 aaKnown RBP19.13■□□□□ 0.65
SCARF1-205ENST00000571272 IRF2BP2Q7Z5L9 587 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 NLRP14Q86W24 1093 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 TMEM59LQ9UK28 342 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 HDAC9Q9UKV0 1011 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 PNMA6FA0A0J9YX94 578 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 FAM170AA1A519 330 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 GOLGA6L10A6NI86 522 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 CETN3O15182 167 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 MYCBPAPQ8TBZ2 947 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 CUL5Q93034 780 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 NT5C3AQ9H0P0 336 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 ISCUQ9H1K1 167 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 BCCIPQ9P287 314 aaKnown RBP eCLIP19.13■□□□□ 0.65
SCARF1-205ENST00000571272 CNTNAP4Q9C0A0 1308 aa19.13■□□□□ 0.65
SCARF1-205ENST00000571272 HMGB1P1B2RPK0 211 aaPredicted RBP19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L15C9J2P7 530 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L13C9JLJ4 530 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L11C9JVI0 530 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L18D6R9N7 530 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L22D6RA61 530 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L17D6RBQ6 530 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L19D6RCP7 530 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L20D6RJB6 530 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms