RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 KRT85P78386 507 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 ID3Q02535 119 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 KLF1Q13351 362 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 ITPK1Q13572 414 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 SUZ12Q15022 739 aaKnown RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 SAFBQ15424 915 aaKnown RBP eCLIP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 NKG7Q16617 165 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 COBLL1Q53SF7 1204 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 SLC35F1Q5T1Q4 408 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 NBPF12Q5TAG4 269 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 STYK1Q6J9G0 422 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 EPM2AIP1Q7L775 607 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 PODNQ7Z5L7 613 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 MORC1Q86VD1 984 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 NXPE1Q8N323 547 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 ENAHQ8N8S7 591 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 KLHL23Q8NBE8 558 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 TMEM145Q8NBT3 493 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 KCT2Q8NC54 265 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 RNF214Q8ND24 703 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 ADCY4Q8NFM4 1077 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 DCAF4Q8WV16 495 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 BRF1Q92994 677 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 TTC17Q96AE7 1141 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 C1orf159Q96HA4 380 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 AIFM3Q96NN9 605 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 DPH2Q9BQC3 489 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 SENP7Q9BQF6 1050 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 USP26Q9BXU7 913 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 MKRN2Q9H000 416 aaKnown RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 PTPRHQ9HD43 1115 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 MAN1C1Q9NR34 630 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 CYP26B1Q9NR63 512 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 ATG3Q9NT62 314 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 CGGBP1Q9UFW8 167 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 ASAP1Q9ULH1 1129 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 ZBTB21Q9ULJ3 1066 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 DIS3Q9Y2L1 958 aaKnown RBP3.95□□□□□ -1.78
CNOT1-221ENST00000569924 TRAF6Q9Y4K3 522 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 C10orf71Q711Q0 1435 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 CNTNAP4Q9C0A0 1308 aa3.95□□□□□ -1.78
CNOT1-221ENST00000569924 PKD1L2Q7Z442 2459 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 LOC100289279A0A1B0GTE1 492 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 FAM187AA6NFU0 413 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 FZD9O00144 591 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 TM4SF5O14894 197 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 NPHP1O15259 732 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 GAS7O60861 476 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 RPS6KA4O75676 772 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 GLRX3O76003 335 aaKnown RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 TOMM70O94826 608 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 LTFP02788 710 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 HSP90AB1P08238 724 aaKnown RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 SNRPB2P08579 225 aaKnown RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 VCAM1P19320 739 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 IARSP41252 1262 aaKnown RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 ZNF280AP59817 542 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 ZNF445P59923 1031 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 OCRLQ01968 901 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 GUCY1A3Q02108 690 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 SLBPQ14493 270 aaKnown RBP eCLIP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 GRM3Q14832 879 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 PCBP2Q15366 365 aaKnown RBP eCLIP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 ARHGAP29Q52LW3 1261 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 TRAPPC3LQ5T215 181 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 ERAP2Q6P179 960 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 ABHD17CQ6PCB6 329 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 USP53Q70EK8 1073 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 SMIM5Q71RC9 77 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 CDC37L1Q7L3B6 337 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 FCHSD1Q86WN1 690 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 TEX2Q8IWB9 1127 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 C1orf162Q8NEQ5 155 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 MYRIPQ8NFW9 859 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 NUDT8Q8WV74 236 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 VWCEQ96DN2 955 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 AHCYL2Q96HN2 611 aaKnown RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 FAXDC2Q96IV6 333 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 DCAF5Q96JK2 942 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 NUP88Q99567 741 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 ELAC2Q9BQ52 826 aaKnown RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 EMC7Q9NPA0 242 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 DISC1Q9NRI5 854 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 RAD18Q9NS91 495 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 CRIM1Q9NZV1 1036 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 POLKQ9UBT6 870 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 PUF60Q9UHX1 559 aaKnown RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 PPP1R9AQ9ULJ8 1098 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 ZKSCAN5Q9Y2L8 839 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 FHOD1Q9Y613 1164 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 C4AP0C0L4 1744 aa3.94□□□□□ -1.78
CNOT1-221ENST00000569924 COL5A3P25940 1745 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 BRCA1P38398 1863 aaKnown RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 N4BP2Q86UW6 1770 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-221ENST00000569924 ARFGEF1Q9Y6D6 1849 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ELOA3CA0A087WX78 387 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 A0A0G2JLW4 131 aa3.93□□□□□ -1.78
CNOT1-221ENST00000569924 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.93□□□□□ -1.78
CNOT1-221ENST00000569924 RASSF10A6NK89 507 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms