RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 JAKMIP1Q96N16 626 aaKnown RBP17.12■□□□□ 0.33
CCNDBP1-213ENST00000568507 RAD9AQ99638 391 aa17.12■□□□□ 0.33
CCNDBP1-213ENST00000568507 NRCAMQ92823 1304 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 GJB5O95377 273 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 CTSHP09668 335 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 FUT2Q10981 343 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 TCTN1Q2MV58 587 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 FAM117BQ6P1L5 589 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 Q6ZUG5 572 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 ATXN2LQ8WWM7 1075 aaKnown RBP17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 SEPT8Q92599 483 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 SMARCAD1Q9H4L7 1026 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 ERAP1Q9NZ08 941 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 THEGQ9P2T0 379 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 TANC1Q9C0D5 1861 aa17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 SPTBN5Q9NRC6 3674 aaKnown RBP17.11■□□□□ 0.33
CCNDBP1-213ENST00000568507 CUL9Q8IWT3 2517 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 GSTTP1A0A1W2PQM5 241 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 STXBP3O00186 592 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 AMHP03971 560 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 CPA1P15085 419 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 CDC27P30260 824 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 HSPA4P34932 840 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 ADD1P35611 737 aaKnown RBP17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 ZNF76P36508 570 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 APOBRQ0VD83 1088 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 TYW1BQ6NUM6 668 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 BLOC1S2Q6QNY1 142 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 KCNB2Q92953 911 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 PGBD1Q96JS3 809 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 SNX14Q9Y5W7 946 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
CCNDBP1-213ENST00000568507 ARHGEF15O94989 841 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 REC8O95072 547 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 MARK3P27448 753 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 PSMA5P28066 241 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 PPFIA1Q13136 1202 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 BRF1Q92994 677 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 KCNH7Q9NS40 1196 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 SLC9A2Q9UBY0 812 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 MTCH2Q9Y6C9 303 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 VCANP13611 3396 aa17.09■□□□□ 0.33
CCNDBP1-213ENST00000568507 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.33
CCNDBP1-213ENST00000568507 LCHNA4D1U4 455 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 EPOPA6NHQ4 379 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 POU3F3P20264 500 aaPredicted RBP17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 ADAM17P78536 824 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 MRPS5P82675 430 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 AKAP17AQ02040 695 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 PFKFB3Q16875 520 aaPredicted RBP17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 CEP55Q53EZ4 464 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 TAF2Q6P1X5 1199 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 RSPH3Q86UC2 560 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 MYOCDQ8IZQ8 938 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 IL27Q8NEV9 243 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 CYP2W1Q8TAV3 490 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 TMEM260Q9NX78 707 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 INSL6Q9Y581 213 aa17.08■□□□□ 0.32
CCNDBP1-213ENST00000568507 IGBP1P78318 339 aa17.07■□□□□ 0.32
CCNDBP1-213ENST00000568507 GRIK4Q16099 956 aa17.07■□□□□ 0.32
CCNDBP1-213ENST00000568507 FAM26DQ5JW98 314 aa17.07■□□□□ 0.32
CCNDBP1-213ENST00000568507 CCDC12Q8WUD4 166 aaPredicted RBP17.07■□□□□ 0.32
CCNDBP1-213ENST00000568507 APBB2Q92870 758 aa17.07■□□□□ 0.32
CCNDBP1-213ENST00000568507 ASB2Q96Q27 587 aa17.07■□□□□ 0.32
CCNDBP1-213ENST00000568507 NFASCO94856 1347 aa17.07■□□□□ 0.32
CCNDBP1-213ENST00000568507 TET1Q8NFU7 2136 aa17.07■□□□□ 0.32
CCNDBP1-213ENST00000568507 GBF1Q92538 1859 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 RRN3P2A6NIE6 340 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 NEFLP07196 543 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 ARP10275 920 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 SCG2P13521 617 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 GRB10Q13322 594 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 TGS1Q96RS0 853 aaKnown RBP17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 AGO4Q9HCK5 861 aaKnown RBP17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 C6orf50Q9HD87 102 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 TUBE1Q9UJT0 475 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 MTUS1Q9ULD2 1270 aa17.06■□□□□ 0.32
CCNDBP1-213ENST00000568507 MEIS1O00470 390 aa17.05■□□□□ 0.32
CCNDBP1-213ENST00000568507 SREBF1P36956 1147 aa17.05■□□□□ 0.32
CCNDBP1-213ENST00000568507 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-213ENST00000568507 ACTR2P61160 394 aa17.05■□□□□ 0.32
CCNDBP1-213ENST00000568507 MCTP2Q6DN12 878 aa17.05■□□□□ 0.32
CCNDBP1-213ENST00000568507 RUFY4Q6ZNE9 571 aa17.05■□□□□ 0.32
CCNDBP1-213ENST00000568507 SPRED2Q7Z698 418 aa17.05■□□□□ 0.32
CCNDBP1-213ENST00000568507 RPAINQ86UA6 219 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms