RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ADAM9Q13443 819 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 SPA17Q15506 151 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 FAM20AQ96MK3 541 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 FAM53CQ9NYF3 392 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 CTAGE15A4D2H0 777 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 CTAGE8P0CG41 777 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 CTTNQ14247 550 aaKnown RBP20.68■□□□□ 0.9
MSLN-207ENST00000566549 SPDYE2Q495Y8 402 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 MCTP2Q6DN12 878 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 CTAGE6Q86UF2 777 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 CTAGE4Q8IX94 777 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 RTKN2Q8IZC4 609 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 PIGOQ8TEQ8 1089 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 CAPZA3Q96KX2 299 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 EIF2AK1Q9BQI3 630 aaKnown RBP20.68■□□□□ 0.9
MSLN-207ENST00000566549 SASH3O75995 380 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 CIITAP33076 1130 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 KIF11P52732 1056 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 WHAMMP3Q1A5X7 153 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 BAP1Q92560 729 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 PNKPQ96T60 521 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 RUSC1Q9BVN2 902 aa20.68■□□□□ 0.9
MSLN-207ENST00000566549 RNF216Q9NWF9 866 aaPredicted RBP20.68■□□□□ 0.9
MSLN-207ENST00000566549 FRMD3A2A2Y4 597 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 AKR1B10O60218 316 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 MYBP10242 640 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 SYT2Q8N9I0 419 aaPredicted RBP20.67■□□□□ 0.9
MSLN-207ENST00000566549 NOA1Q8NC60 698 aaKnown RBP20.67■□□□□ 0.9
MSLN-207ENST00000566549 ZBTB9Q96C00 473 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 LSM14BQ9BX40 385 aaKnown RBP20.67■□□□□ 0.9
MSLN-207ENST00000566549 IFIH1Q9BYX4 1025 aaKnown RBP20.67■□□□□ 0.9
MSLN-207ENST00000566549 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.67■□□□□ 0.9
MSLN-207ENST00000566549 IGLV3-22A0A075B6J6 115 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 PRPF6O94906 941 aaKnown RBP20.67■□□□□ 0.9
MSLN-207ENST00000566549 NR2F2P24468 414 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 VAV2P52735 878 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 KIF5AQ12840 1032 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 TUBB2AQ13885 445 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 TUBB2BQ9BVA1 445 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 PITPNM2Q9BZ72 1349 aa20.67■□□□□ 0.9
MSLN-207ENST00000566549 COL2A1P02458 1487 aaPredicted RBP20.67■□□□□ 0.9
MSLN-207ENST00000566549 SMCHD1A6NHR9 2005 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 SHTN1A0MZ66 631 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 SFI1A8K8P3 1242 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 GCOM1H8Y6P7 765 aaPredicted RBP20.66■□□□□ 0.9
MSLN-207ENST00000566549 PIK3CDO00329 1044 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 ZBTB39O15060 712 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 POLR2MP0CAP2 368 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 HNRNPH3P31942 346 aaKnown RBP20.66■□□□□ 0.9
MSLN-207ENST00000566549 CDK17Q00537 523 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 TRAPPC11Q7Z392 1133 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 TPH2Q8IWU9 490 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 IQCDQ96DY2 449 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 DRC1Q96MC2 740 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 CEP63Q96MT8 703 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 ARFGAP3Q9NP61 516 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 KIF20AO95235 890 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 TBC1D8O95759 1140 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 NBPF9Q3BBW0 867 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 TDRD12Q587J7 1177 aaKnown RBP20.66■□□□□ 0.9
MSLN-207ENST00000566549 PDXDC1Q6P996 788 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 PSMD1Q99460 953 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 MLXIPQ9HAP2 919 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 RABGAP1Q9Y3P9 1069 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 PCDHA13Q9Y5I0 950 aa20.66■□□□□ 0.9
MSLN-207ENST00000566549 CYP3A4P08684 503 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 EPS15P42566 896 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 PLA2G4AP47712 749 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 POLR2FP61218 127 aaKnown RBP20.65■□□□□ 0.9
MSLN-207ENST00000566549 ENOX2Q16206 610 aaKnown RBP20.65■□□□□ 0.9
MSLN-207ENST00000566549 LRCH2Q5VUJ6 765 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 TRIM59Q8IWR1 403 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 SECISBP2LQ93073 1101 aaKnown RBP20.65■□□□□ 0.9
MSLN-207ENST00000566549 VCPKMTQ9H867 229 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 SAR1BQ9Y6B6 198 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 KCNA3P22001 575 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 HOXA7P31268 230 aaPredicted RBP20.65■□□□□ 0.9
MSLN-207ENST00000566549 ARID5AQ03989 594 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 GFPT1Q06210 699 aaPredicted RBP20.65■□□□□ 0.9
MSLN-207ENST00000566549 ANKRD13CQ8N6S4 541 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 EHBP1Q8NDI1 1231 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 DYDC2Q96IM9 177 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 ZMYND15Q9H091 742 aa20.65■□□□□ 0.9
MSLN-207ENST00000566549 CETN3O15182 167 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 NOL4O94818 638 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 POLD1P28340 1107 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 KCNA1Q09470 495 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 POTEAQ6S8J7 498 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 DEFB132Q7Z7B7 95 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 NIM1KQ8IY84 436 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 RANBP17Q9H2T7 1088 aaKnown RBP20.64■□□□□ 0.89
MSLN-207ENST00000566549 JADE2Q9NQC1 790 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 ZNF185O15231 689 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 SLC26A4O43511 780 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 TBCAO75347 108 aaKnown RBP20.64■□□□□ 0.89
MSLN-207ENST00000566549 HOXD13P35453 343 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 FOXR2Q6PJQ5 311 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 MMS19Q96T76 1030 aa20.64■□□□□ 0.89
MSLN-207ENST00000566549 IKZF4Q9H2S9 585 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms