RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 CACNA2D4Q7Z3S7 1137 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 HEATR3Q7Z4Q2 680 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 NT5DC4Q86YG4 428 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 WHAMMQ8TF30 809 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 CCDC43Q96MW1 224 aaKnown RBP12.07□□□□□ -0.48
TCF4-232ENST00000566286 PSMB7Q99436 277 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 LZTS2Q9BRK4 669 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 EPN3Q9H201 632 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 EPHB6O15197 1021 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 HEXIM1O94992 359 aaKnown RBP12.07□□□□□ -0.48
TCF4-232ENST00000566286 LSP1P33241 339 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 MNAT1P51948 309 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 NONOQ15233 471 aaKnown RBP eCLIP12.07□□□□□ -0.48
TCF4-232ENST00000566286 CRTC2Q53ET0 693 aaPredicted RBP12.07□□□□□ -0.48
TCF4-232ENST00000566286 TTC19Q6DKK2 380 aaPredicted RBP12.07□□□□□ -0.48
TCF4-232ENST00000566286 UNC13DQ70J99 1090 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 SV2BQ7L1I2 683 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
TCF4-232ENST00000566286 BAP1Q92560 729 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 STK17AQ9UEE5 414 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 MAD2L2Q9UI95 211 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 GGA2Q9UJY4 613 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 HMGB1P1B2RPK0 211 aaPredicted RBP12.06□□□□□ -0.48
TCF4-232ENST00000566286 H0YHG0 523 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 NCK2O43639 380 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 CCNT1O60563 726 aaKnown RBP12.06□□□□□ -0.48
TCF4-232ENST00000566286 KRT14P02533 472 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 NR1D1P20393 614 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 NAP1L1P55209 391 aaKnown RBP12.06□□□□□ -0.48
TCF4-232ENST00000566286 TFAP4Q01664 338 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 RASSF7Q02833 373 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 MECOMQ03112 1051 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
TCF4-232ENST00000566286 SLC9C1Q4G0N8 1177 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 STAG2Q8N3U4 1231 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 SYN2Q92777 582 aaPredicted RBP12.06□□□□□ -0.48
TCF4-232ENST00000566286 CLP1Q92989 425 aaKnown RBP12.06□□□□□ -0.48
TCF4-232ENST00000566286 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 FAM84BQ96KN1 310 aaPredicted RBP12.06□□□□□ -0.48
TCF4-232ENST00000566286 ZMYND12Q9H0C1 365 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 RABEP2Q9H5N1 569 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
TCF4-232ENST00000566286 SMARCAL1Q9NZC9 954 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 EHD2Q9NZN4 543 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 NFU1Q9UMS0 254 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 ZNF652Q9Y2D9 606 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 CAPN7Q9Y6W3 813 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 SBF2Q86WG5 1849 aa12.06□□□□□ -0.48
TCF4-232ENST00000566286 GLI1P08151 1106 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 CARSP49589 748 aaKnown RBP12.05□□□□□ -0.48
TCF4-232ENST00000566286 MRPS25P82663 173 aaKnown RBP12.05□□□□□ -0.48
TCF4-232ENST00000566286 GUCY2DQ02846 1103 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 EVX2Q03828 476 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 GFPT1Q06210 699 aaPredicted RBP12.05□□□□□ -0.48
TCF4-232ENST00000566286 LETM2Q2VYF4 491 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 FBXW10Q5XX13 1052 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 CLEC4GQ6UXB4 293 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 NEK8Q86SG6 692 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 EIF1ADQ8N9N8 165 aaKnown RBP12.05□□□□□ -0.48
TCF4-232ENST00000566286 MORC4Q8TE76 937 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 LRRN4Q8WUT4 740 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 CABS1Q96KC9 395 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 TSG101Q99816 390 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 TMEM106CQ9BVX2 250 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 EPB41L5Q9HCM4 733 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 SLC39A2Q9NP94 309 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 SALL4Q9UJQ4 1053 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 LY75O60449 1722 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 COL4A1P02462 1669 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 ZNF233A6NK53 670 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 CYP2D6P10635 497 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 GNA11P29992 359 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 ATP1A2P50993 1020 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 TDRD12Q587J7 1177 aaKnown RBP12.05□□□□□ -0.48
TCF4-232ENST00000566286 KCTD16Q68DU8 428 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 KCNV1Q6PIU1 500 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 SH2D3CQ8N5H7 860 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 ARFGAP2Q8N6H7 521 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 ATP6V1G3Q96LB4 118 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 RNPC3Q96LT9 517 aaKnown RBP12.05□□□□□ -0.48
TCF4-232ENST00000566286 LRRC27Q9C0I9 530 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 C6orf50Q9HD87 102 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 RIC8AQ9NPQ8 531 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 MCM9Q9NXL9 1143 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 CEP72Q9P209 647 aa12.05□□□□□ -0.48
TCF4-232ENST00000566286 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 GOLGA6L10A6NI86 522 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 NKRFO15226 690 aaKnown RBP eCLIP12.04□□□□□ -0.48
TCF4-232ENST00000566286 BUB1O43683 1085 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 SERPING1P05155 500 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 TECP42680 631 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 SLC1A4P43007 532 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 FNTAP49354 379 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 TNNC1P63316 161 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 PSMD2Q13200 908 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms