RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CDC37Q16543 378 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 TBC1D22AQ8WUA7 517 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 TM6SF1Q9BZW5 370 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 TCP11L1Q9NUJ3 509 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 WRAP73Q9P2S5 460 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 FAM198AQ9UFP1 575 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 DNAI1Q9UI46 699 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 NID2Q14112 1375 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 CNTNAP5Q8WYK1 1306 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 MYCLP12524 364 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 ELF2Q15723 593 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ZNF804AQ7Z570 1209 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 MCF2L2Q86YR7 1114 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 FAM118BQ9BPY3 351 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 VCX3BQ9H321 246 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 GPRC5CQ9NQ84 441 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 CSMD2Q7Z408 3487 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 MARK3P27448 753 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 IGBP1P78318 339 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 UBE3CQ15386 1083 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 C12orf60Q5U649 245 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 RFX8Q6ZV50 586 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 NFE2L3Q9Y4A8 694 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ELP1O95163 1332 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 RHOXF2BP0C7M4 288 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 ALDH1B1P30837 517 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 ZNF75DP51815 510 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 FANCCQ00597 558 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 RHOXF2Q9BQY4 288 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 SMCHD1A6NHR9 2005 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 POTEB3A0JP26 581 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 POTECB2RU33 542 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 URI1O94763 535 aaPredicted RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 NOVP48745 357 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 MAP3K9P80192 1104 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 SLC7A5Q01650 507 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 ORC1Q13415 861 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 POSTNQ15063 836 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 POTEBQ6S5H4 581 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 CTCFLQ8NI51 663 aaPredicted RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 MCCC1Q96RQ3 725 aaPredicted RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 HOMER3Q9NSC5 361 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 RTL9Q8NET4 1388 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 RPL13P26373 211 aaKnown RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 ACBD5Q5T8D3 534 aaPredicted RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 ARHGAP27Q6ZUM4 889 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 FAM200AQ8TCP9 573 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 ANKRD2Q9GZV1 360 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 HARSP12081 509 aaKnown RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 CCHCR1Q8TD31 782 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 HHATLQ9HCP6 504 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 FAM237AA0A1B0GTK4 181 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 APOA4P06727 396 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 PDHBP11177 359 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 FXR1P51114 621 aaKnown RBP eCLIP3.68□□□□□ -1.82
CHD9-213ENST00000564845 TBC1D8BQ0IIM8 1120 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 PLCB4Q15147 1175 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 NBPF12Q5TAG4 269 aaPredicted RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 APOBEC3HQ6NTF7 200 aaKnown RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 ARFGAP2Q8N6H7 521 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 KIFAP3Q92845 792 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 MYO3BQ8WXR4 1341 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 H0YIN7 160 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 NEBLO76041 1014 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 OSTNP61366 133 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 STK4Q13043 487 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 ICE2Q659A1 982 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 LLGL2Q6P1M3 1020 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 ARHGAP24Q8N264 748 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 GPR161Q8N6U8 529 aaKnown RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 POP1Q99575 1024 aaKnown RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 SLF1Q9BQI6 1058 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 PPCSQ9HAB8 311 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 RIPK3Q9Y572 518 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 BTAF1O14981 1849 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 COL4A5P29400 1685 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 PIAS1O75925 651 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 INPP5BP32019 993 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 STAT6P42226 847 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 PSMC4P43686 418 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 FAM160A1Q05DH4 1040 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 TTC38Q5R3I4 469 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 HAUS3Q68CZ6 603 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 ANKRD13AQ8IZ07 590 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 SPATA20Q8TB22 786 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 PAGE5Q96GU1 130 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 RBM17Q96I25 401 aaKnown RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 WDR24Q96S15 920 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 HAUS8Q9BT25 410 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 PAGR1Q9BTK6 254 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 WDR11Q9BZH6 1224 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 GINS2Q9Y248 185 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 XDHP47989 1333 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 SCG2P13521 617 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 PLCG1P19174 1290 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 SFSWAPQ12872 951 aaKnown RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 DAAM2Q86T65 1068 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 EFCAB13Q8IY85 973 aa3.68□□□□□ -1.82
CHD9-213ENST00000564845 MRPL44Q9H9J2 332 aaKnown RBP3.68□□□□□ -1.82
CHD9-213ENST00000564845 ANO10Q9NW15 660 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms