RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 FAM26FQ5R3K3 315 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 IRF2BP1Q8IU81 584 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 OTUD5Q96G74 571 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 DYDC2Q96IM9 177 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 DUSP9Q99956 384 aaKnown RBP28.06■■■□□ 2.08
LINC01003-201ENST00000564834 AGO4Q9HCK5 861 aaKnown RBP28.06■■■□□ 2.08
LINC01003-201ENST00000564834 EEF1GP26641 437 aaKnown RBP28.06■■■□□ 2.08
LINC01003-201ENST00000564834 TBX2Q13207 712 aaPredicted RBP28.06■■■□□ 2.08
LINC01003-201ENST00000564834 ANKRD40Q6AI12 368 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 PNMA8AQ86V59 439 aaPredicted RBP28.06■■■□□ 2.08
LINC01003-201ENST00000564834 CSGALNACT2Q8N6G5 542 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 NEK9Q8TD19 979 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 CLMNQ96JQ2 1002 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 SRRTQ9BXP5 876 aaKnown RBP28.06■■■□□ 2.08
LINC01003-201ENST00000564834 KIAA1217Q5T5P2 1943 aa28.06■■■□□ 2.08
LINC01003-201ENST00000564834 KRT18P05783 430 aaKnown RBP28.05■■■□□ 2.08
LINC01003-201ENST00000564834 SKILP12757 684 aa28.05■■■□□ 2.08
LINC01003-201ENST00000564834 CTTNQ14247 550 aaKnown RBP28.05■■■□□ 2.08
LINC01003-201ENST00000564834 PLS1Q14651 629 aa28.05■■■□□ 2.08
LINC01003-201ENST00000564834 MB21D1Q8N884 522 aa28.05■■■□□ 2.08
LINC01003-201ENST00000564834 DHX15O43143 795 aaKnown RBP28.04■■■□□ 2.08
LINC01003-201ENST00000564834 TEX33O43247 280 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 COPB1P53618 953 aaKnown RBP28.04■■■□□ 2.08
LINC01003-201ENST00000564834 FOXR2Q6PJQ5 311 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 LBX2Q6XYB7 198 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 GADL1Q6ZQY3 521 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 MOB2Q70IA6 237 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 TPH2Q8IWU9 490 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 C17orf53Q8N3J3 647 aaPredicted RBP28.04■■■□□ 2.08
LINC01003-201ENST00000564834 BHMT2Q9H2M3 363 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 SEMA6BQ9H3T3 888 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 KCNH4Q9UQ05 1017 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 LCTP09848 1927 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 NPHP3-ACAD11A0A0J9YXS1 232 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 MYCLP12524 364 aaPredicted RBP28.04■■■□□ 2.08
LINC01003-201ENST00000564834 PBX1P40424 430 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 PTPN21Q16825 1174 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 ARMC9Q7Z3E5 817 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 A1CFQ9NQ94 594 aaKnown RBP28.04■■■□□ 2.08
LINC01003-201ENST00000564834 TBC1D22BQ9NU19 505 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 CYP39A1Q9NYL5 469 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 PCDHA2Q9Y5H9 948 aa28.04■■■□□ 2.08
LINC01003-201ENST00000564834 NRDCO43847 1150 aa28.03■■■□□ 2.08
LINC01003-201ENST00000564834 CCND2P30279 289 aa28.03■■■□□ 2.08
LINC01003-201ENST00000564834 LRRC63Q05C16 580 aa28.03■■■□□ 2.08
LINC01003-201ENST00000564834 PPIL2Q13356 520 aa28.03■■■□□ 2.08
LINC01003-201ENST00000564834 GIT2Q14161 759 aa28.03■■■□□ 2.08
LINC01003-201ENST00000564834 FAM114A1Q8IWE2 563 aa28.03■■■□□ 2.08
LINC01003-201ENST00000564834 MYOCDQ8IZQ8 938 aa28.03■■■□□ 2.08
LINC01003-201ENST00000564834 CHST13Q8NET6 341 aa28.03■■■□□ 2.08
LINC01003-201ENST00000564834 NSUN6Q8TEA1 469 aaKnown RBP28.03■■■□□ 2.08
LINC01003-201ENST00000564834 PURBQ96QR8 312 aaKnown RBP28.03■■■□□ 2.08
LINC01003-201ENST00000564834 MAGEC2Q9UBF1 373 aaPredicted RBP28.03■■■□□ 2.08
LINC01003-201ENST00000564834 N4BP3O15049 544 aa28.02■■■□□ 2.08
LINC01003-201ENST00000564834 ITGB3BPQ13352 177 aaPredicted RBP28.02■■■□□ 2.08
LINC01003-201ENST00000564834 HERC4Q5GLZ8 1057 aaPredicted RBP28.02■■■□□ 2.08
LINC01003-201ENST00000564834 VSIG10LQ86VR7 867 aa28.02■■■□□ 2.08
LINC01003-201ENST00000564834 NR3C2P08235 984 aa28.01■■■□□ 2.08
LINC01003-201ENST00000564834 CACNB1Q02641 598 aaPredicted RBP28.01■■■□□ 2.08
LINC01003-201ENST00000564834 NACC1Q96RE7 527 aa28.01■■■□□ 2.08
LINC01003-201ENST00000564834 REEP2Q9BRK0 252 aa28.01■■■□□ 2.08
LINC01003-201ENST00000564834 TAB2Q9NYJ8 693 aa28.01■■■□□ 2.08
LINC01003-201ENST00000564834 DDX39AO00148 427 aaKnown RBP28.01■■■□□ 2.07
LINC01003-201ENST00000564834 RAD51AP2Q09MP3 1159 aa28.01■■■□□ 2.07
LINC01003-201ENST00000564834 MIER3Q7Z3K6 550 aa28.01■■■□□ 2.07
LINC01003-201ENST00000564834 CCDC112Q8NEF3 446 aa28.01■■■□□ 2.07
LINC01003-201ENST00000564834 PKD2L1Q9P0L9 805 aa28.01■■■□□ 2.07
LINC01003-201ENST00000564834 ITIH6Q6UXX5 1313 aa28■■■□□ 2.07
LINC01003-201ENST00000564834 KIF20AO95235 890 aa28■■■□□ 2.07
LINC01003-201ENST00000564834 IRX3P78415 501 aaPredicted RBP28■■■□□ 2.07
LINC01003-201ENST00000564834 CREBRFQ8IUR6 639 aa28■■■□□ 2.07
LINC01003-201ENST00000564834 GLIS3Q8NEA6 775 aa28■■■□□ 2.07
LINC01003-201ENST00000564834 PIGOQ8TEQ8 1089 aa28■■■□□ 2.07
LINC01003-201ENST00000564834 GPRASP2Q96D09 838 aa28■■■□□ 2.07
LINC01003-201ENST00000564834 LXNQ9BS40 222 aa28■■■□□ 2.07
LINC01003-201ENST00000564834 VPS16Q9H269 839 aa28■■■□□ 2.07
LINC01003-201ENST00000564834 TESPA1A2RU30 521 aaPredicted RBP27.99■■■□□ 2.07
LINC01003-201ENST00000564834 OFD1O75665 1012 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 RINT1Q6NUQ1 792 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.99■■■□□ 2.07
LINC01003-201ENST00000564834 RUSC1Q9BVN2 902 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 AGTPBP1Q9UPW5 1226 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 MAFGO15525 162 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 FGFR1OPO95684 399 aaKnown RBP27.99■■■□□ 2.07
LINC01003-201ENST00000564834 LRRC41Q15345 812 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 RIOX2Q8IUF8 465 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 OPTNQ96CV9 577 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 INPP4AQ96PE3 977 aaPredicted RBP27.99■■■□□ 2.07
LINC01003-201ENST00000564834 TSG101Q99816 390 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 WRAP73Q9P2S5 460 aaPredicted RBP27.99■■■□□ 2.07
LINC01003-201ENST00000564834 FBXO40Q9UH90 709 aa27.99■■■□□ 2.07
LINC01003-201ENST00000564834 MYH11P35749 1972 aa27.98■■■□□ 2.07
LINC01003-201ENST00000564834 WDR81Q562E7 1941 aa27.98■■■□□ 2.07
LINC01003-201ENST00000564834 NLRX1Q86UT6 975 aa27.98■■■□□ 2.07
LINC01003-201ENST00000564834 CNOT6LQ96LI5 555 aaKnown RBP27.98■■■□□ 2.07
LINC01003-201ENST00000564834 KCND2Q9NZV8 630 aa27.98■■■□□ 2.07
LINC01003-201ENST00000564834 TBC1D7Q9P0N9 293 aa27.98■■■□□ 2.07
LINC01003-201ENST00000564834 BTBD7Q9P203 1132 aa27.98■■■□□ 2.07
LINC01003-201ENST00000564834 STAM2O75886 525 aa27.97■■■□□ 2.07
LINC01003-201ENST00000564834 P4HBP07237 508 aaKnown RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms