RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	MIS18BP1	Q6P0N0	1132 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	ACRBP	Q8NEB7	543 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	NEK9	Q8TD19	979 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	FNTA	P49354	379 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	RESP18	Q5W5W9	173 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	TUBA3E	Q6PEY2	450 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	SERPINB12	Q96P63	405 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	C1orf50	Q9BV19	199 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288		F6X3S4	739 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	BAG3	O95817	575 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	PMS2	P54278	862 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	TOGARAM2	Q6ZUX3	1019 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	SYT2	Q8N9I0	419 aa	Predicted RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	APBB2	Q92870	758 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.59	□□□□□ -1.67	6e-6	■■■■■ 55.1
MACF1-231	ENST00000564288	PLTP	P55058	493 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	EP400NL	Q6ZTU2	488 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	RNF17	Q9BXT8	1623 aa	Known RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	RTN2	O75298	545 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	R3HDM1	Q15032	1099 aa	Known RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	FSCB	Q5H9T9	825 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	FBXL16	Q8N461	479 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	PDLIM1	O00151	329 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	APOE	P02649	317 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	STX3	Q13277	289 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	KBTBD3	Q8NAB2	608 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	DESI2	Q9BSY9	194 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	TAB2	Q9NYJ8	693 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	ZNF212	Q9UDV6	495 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	ZNF652	Q9Y2D9	606 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	PGRMC1	O00264	195 aa	Known RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	PNOC	Q13519	176 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	UNC13D	Q70J99	1090 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	SEPT11	Q9NVA2	429 aa	Known RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	MCF2	P10911	925 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	CPA3	P15088	417 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	EIF4A3	P38919	411 aa	Known RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	CCNG1	P51959	295 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	DNAL1	Q4LDG9	190 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	TMEM132E	Q6IEE7	984 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	PPP4R3CP	Q6ZMV5	832 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	CDC37L1	Q7L3B6	337 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	AFAP1L2	Q8N4X5	818 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	CXorf38	Q8TB03	319 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	AMOTL2	Q9Y2J4	779 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	TBC1D12	O60347	775 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	PDHA1	P08559	390 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	ANKRD13D	Q6ZTN6	518 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	DISP1	Q96F81	1524 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	EPC1	Q9H2F5	836 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	COX4I2	Q96KJ9	171 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	ANKZF1	Q9H8Y5	726 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	GPC6	Q9Y625	555 aa	Predicted RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	ENC1	O14682	589 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	NXN	Q6DKJ4	435 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	PABPC3	Q9H361	631 aa	Known RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	DNA2	P51530	1060 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	UBN1	Q9NPG3	1134 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	STAT2	P52630	851 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	ANKS1A	Q92625	1134 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	NAPB	Q9H115	298 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	ZHX3	Q9H4I2	956 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	TACC3	Q9Y6A5	838 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	MATN2	O00339	956 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	CHMP2B	Q9UQN3	213 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	FOXR1	Q6PIV2	292 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	DIABLO	Q9NR28	239 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	LRP2BP	Q9P2M1	347 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	TNKS	O95271	1327 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	PNPLA6	Q8IY17	1366 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	EFCAB6	Q5THR3	1501 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288		H0YCG3	227 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	SUPT3H	O75486	399 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	TBX2	Q13207	712 aa	Predicted RBP	4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	PCDHGC5	Q9Y5F6	944 aa		4.59	□□□□□ -1.68
MACF1-231	ENST00000564288	AREL1	O15033	823 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	HEXIM1	O94992	359 aa	Known RBP	4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	STARD3NL	O95772	234 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	IDO1	P14902	403 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	IFIT5	Q13325	482 aa	Known RBP	4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	MREG	Q8N565	214 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	HAUS7	Q99871	368 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	TSC22D4	Q9Y3Q8	395 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	SYCE1L	A8MT33	242 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	GFAP	P14136	432 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	STK17A	Q9UEE5	414 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	CLIC4	Q9Y696	253 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	TMEM110-MUSTN1	A8MSY1	372 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	MIF4GD	A9UHW6	222 aa	Known RBP	4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	TMEM110	Q86TL2	294 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	PLEKHA4	Q9H4M7	779 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	SOWAHD	A6NJG2	315 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	MFAP3L	O75121	409 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	KRT6A	P02538	564 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	KRT6B	P04259	564 aa		4.58	□□□□□ -1.68
MACF1-231	ENST00000564288	KRT6C	P48668	564 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms