RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 KREMEN2Q8NCW0 462 aa18.56■□□□□ 0.56
RNF40-205ENST00000563909 ZNF689Q96CS4 500 aaPredicted RBP18.56■□□□□ 0.56
RNF40-205ENST00000563909 SEC62Q99442 399 aaKnown RBP18.56■□□□□ 0.56
RNF40-205ENST00000563909 RNPEPQ9H4A4 650 aa18.56■□□□□ 0.56
RNF40-205ENST00000563909 PCDHGC5Q9Y5F6 944 aa18.56■□□□□ 0.56
RNF40-205ENST00000563909 MRPL42Q9Y6G3 142 aaKnown RBP18.56■□□□□ 0.56
RNF40-205ENST00000563909 KIAA1217Q5T5P2 1943 aa18.56■□□□□ 0.56
RNF40-205ENST00000563909 H3BRB1 525 aa18.55■□□□□ 0.56
RNF40-205ENST00000563909 ENPP3O14638 875 aa18.55■□□□□ 0.56
RNF40-205ENST00000563909 PDHBP11177 359 aa18.55■□□□□ 0.56
RNF40-205ENST00000563909 HOXC8P31273 242 aa18.55■□□□□ 0.56
RNF40-205ENST00000563909 RBM10P98175 930 aaKnown RBP18.55■□□□□ 0.56
RNF40-205ENST00000563909 NAALADL2Q58DX5 795 aa18.55■□□□□ 0.56
RNF40-205ENST00000563909 KLHL23Q8NBE8 558 aa18.55■□□□□ 0.56
RNF40-205ENST00000563909 POF1BQ8WVV4 589 aa18.55■□□□□ 0.56
RNF40-205ENST00000563909 RMDN1Q96DB5 314 aa18.55■□□□□ 0.56
RNF40-205ENST00000563909 TUT1Q9H6E5 874 aaKnown RBP18.55■□□□□ 0.56
RNF40-205ENST00000563909 PER2O15055 1255 aa18.54■□□□□ 0.56
RNF40-205ENST00000563909 DGKIO75912 1065 aa18.54■□□□□ 0.56
RNF40-205ENST00000563909 SP100P23497 879 aaPredicted RBP18.54■□□□□ 0.56
RNF40-205ENST00000563909 ZNF543Q08ER8 600 aa18.54■□□□□ 0.56
RNF40-205ENST00000563909 CELF3Q5SZQ8 465 aaKnown RBP18.54■□□□□ 0.56
RNF40-205ENST00000563909 MICAL1Q8TDZ2 1067 aa18.54■□□□□ 0.56
RNF40-205ENST00000563909 OTUD7AQ8TE49 926 aaPredicted RBP18.54■□□□□ 0.56
RNF40-205ENST00000563909 MAF1Q9H063 256 aa18.54■□□□□ 0.56
RNF40-205ENST00000563909 ZFHX4Q86UP3 3567 aa18.54■□□□□ 0.56
RNF40-205ENST00000563909 SALL3Q9BXA9 1300 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 MYH7BA7E2Y1 1941 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 GGPS1O95749 300 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 NR3C2P08235 984 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 FAM26DQ5JW98 314 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 ASTLQ6HA08 431 aaPredicted RBP18.53■□□□□ 0.56
RNF40-205ENST00000563909 UBALD2Q8IYN6 164 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 VN1R2Q8NFZ6 395 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 ATP8B4Q8TF62 1192 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 SETD4Q9NVD3 440 aa18.53■□□□□ 0.56
RNF40-205ENST00000563909 EP300Q09472 2414 aaPredicted RBP18.53■□□□□ 0.56
RNF40-205ENST00000563909 PPFIA3O75145 1194 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 CHRNA1P02708 482 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 GHRP10912 638 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 GNAT1P11488 350 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 PDE1AP54750 535 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 MTMR3Q13615 1198 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 CNTNAP3BQ96NU0 1288 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 NEK1Q96PY6 1258 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 CNTNAP3Q9BZ76 1288 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 TOMM22Q9NS69 142 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 SORCS3Q9UPU3 1222 aa18.52■□□□□ 0.56
RNF40-205ENST00000563909 CACNA1GO43497 2377 aa18.52■□□□□ 0.55
RNF40-205ENST00000563909 ABCB11O95342 1321 aa18.51■□□□□ 0.55
RNF40-205ENST00000563909 BRD1O95696 1058 aa18.51■□□□□ 0.55
RNF40-205ENST00000563909 MYCLP12524 364 aaPredicted RBP18.51■□□□□ 0.55
RNF40-205ENST00000563909 SP2Q02086 613 aa18.51■□□□□ 0.55
RNF40-205ENST00000563909 CPVLQ9H3G5 476 aa18.51■□□□□ 0.55
RNF40-205ENST00000563909 MLXIPQ9HAP2 919 aa18.51■□□□□ 0.55
RNF40-205ENST00000563909 PXMP2Q9NR77 195 aa18.51■□□□□ 0.55
RNF40-205ENST00000563909 TSHZ2Q9NRE2 1034 aa18.51■□□□□ 0.55
RNF40-205ENST00000563909 ORC4O43929 436 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 LGALS2P05162 132 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 GOLGA8HP0CJ92 632 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 LPIN1Q14693 890 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 PAN2Q504Q3 1202 aaKnown RBP18.5■□□□□ 0.55
RNF40-205ENST00000563909 KCNV1Q6PIU1 500 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 CMTR2Q8IYT2 770 aaKnown RBP18.5■□□□□ 0.55
RNF40-205ENST00000563909 PI4K2BQ8TCG2 481 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 APOL5Q9BWW9 433 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 UBA5Q9GZZ9 404 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 S1PR5Q9H228 398 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 MFSD1Q9H3U5 465 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 OSBPL3Q9H4L5 887 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 EHMT1Q9H9B1 1298 aa18.5■□□□□ 0.55
RNF40-205ENST00000563909 HSPD1P10809 573 aaKnown RBP18.49■□□□□ 0.55
RNF40-205ENST00000563909 RRP12Q5JTH9 1297 aaKnown RBP18.49■□□□□ 0.55
RNF40-205ENST00000563909 KCNG4Q8TDN1 519 aa18.49■□□□□ 0.55
RNF40-205ENST00000563909 SMOC2Q9H3U7 446 aa18.49■□□□□ 0.55
RNF40-205ENST00000563909 NR2E1Q9Y466 385 aa18.49■□□□□ 0.55
RNF40-205ENST00000563909 SNHG28P0DPA3 235 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 UBA1P22314 1058 aaKnown RBP18.48■□□□□ 0.55
RNF40-205ENST00000563909 PDE4AP27815 886 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 CLCN5P51795 746 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 ARHGAP4P98171 946 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 CDC37Q16543 378 aaPredicted RBP18.48■□□□□ 0.55
RNF40-205ENST00000563909 DUSP6Q16828 381 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 ZMYM1Q5SVZ6 1142 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 KIAA2013Q8IYS2 634 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 TCP11L1Q9NUJ3 509 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 ANAPC4Q9UJX5 808 aa18.48■□□□□ 0.55
RNF40-205ENST00000563909 TPRP12270 2363 aaKnown RBP18.47■□□□□ 0.55
RNF40-205ENST00000563909 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
RNF40-205ENST00000563909 FOXP2O15409 715 aa18.47■□□□□ 0.55
RNF40-205ENST00000563909 CFBP00751 764 aa18.47■□□□□ 0.55
RNF40-205ENST00000563909 SRGAP2BP0DMP2 458 aa18.47■□□□□ 0.55
RNF40-205ENST00000563909 TECP42680 631 aa18.47■□□□□ 0.55
RNF40-205ENST00000563909 PUM1Q14671 1186 aaKnown RBP eCLIP18.47■□□□□ 0.55
RNF40-205ENST00000563909 CDCA3Q99618 268 aaPredicted RBP18.47■□□□□ 0.55
RNF40-205ENST00000563909 BCAS3Q9H6U6 928 aa18.47■□□□□ 0.55
RNF40-205ENST00000563909 MRPL11Q9Y3B7 192 aaKnown RBP18.47■□□□□ 0.55
RNF40-205ENST00000563909 TTC3P53804 2025 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms