RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 DHX37Q8IY37 1157 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 GALNT6Q8NCL4 622 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 GMCL1P1Q8NEA9 526 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 UBE2Q2Q8WVN8 375 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 EDARADDQ8WWZ3 215 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 BRF1Q92994 677 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 TNFRSF25Q93038 417 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 CAPNS2Q96L46 248 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 FEZ1Q99689 392 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 MDFIQ99750 246 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 SH2D4AQ9H788 454 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 CCSER2Q9H7U1 834 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 VCPKMTQ9H867 229 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 AS3MTQ9HBK9 375 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 NID2Q14112 1375 aa6.06□□□□□ -1.44
HERPUD1-207ENST00000563781 PHIPQ8WWQ0 1821 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 KLF18A0A0U1RQI7 1052 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 ERICH2A1L162 156 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 ADARB2-AS1A8MUL3 147 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 C19orf81C9J6K1 198 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 F5H6K3 240 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 NDUFB5O43674 189 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 AOC2O75106 756 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 DDAH1O94760 285 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 LARGE1O95461 756 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 RARAP10276 462 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 PDHBP11177 359 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 PCSK2P16519 638 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 VCAM1P19320 739 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 USP14P54578 494 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 KLRC3Q07444 240 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 ZNF543Q08ER8 600 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 ST3GAL1Q11201 340 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 SNAPC2Q13487 334 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 GNL2Q13823 731 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 GRM4Q14833 912 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 SART3Q15020 963 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 DEFB115Q30KQ5 88 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 TREML2Q5T2D2 321 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 SLFN13Q68D06 897 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 ZNF662Q6ZS27 426 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 RAB11FIP4Q86YS3 637 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 ZNF654Q8IZM8 581 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 GJD3Q8N144 294 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 TMEM87AQ8NBN3 555 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 DCAF4Q8WV16 495 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 DMRTB1Q96MA1 342 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 NUP88Q99567 741 aaPredicted RBP6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 PTPN18Q99952 460 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 MYL10Q9BUA6 226 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 KAT14Q9H8E8 782 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 TPCN1Q9ULQ1 816 aa6.05□□□□□ -1.44
HERPUD1-207ENST00000563781 ATAD5Q96QE3 1844 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 CCL15-CCL14A0A0B4J2E2 113 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 A6NHS1 94 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 MANSC4A6NHS7 340 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 CCDC69A6NI79 296 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 GOLGA8BA8MQT2 603 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 BTBD19C9JJ37 291 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 IGF2BP3O00425 579 aaKnown RBP eCLIP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 WDR46O15213 610 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 SORBS3O60504 671 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 IGHA2P01877 340 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 CETPP11597 493 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 EPXP11678 715 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 RXRAP19793 462 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 PDIA3P30101 505 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 ZNF76P36508 570 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 GTF2A2P52657 109 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 RCAN1P53805 252 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 KIF23Q02241 960 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 ANKRD1Q15327 319 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 CCL15Q16663 113 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 FAM83BQ5T0W9 1011 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 EGFLAMQ63HQ2 1017 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 TTBK2Q6IQ55 1244 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 PDE12Q6L8Q7 609 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 NFXL1Q6ZNB6 911 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 GADL1Q6ZQY3 521 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 NOL8Q76FK4 1167 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 CATIPQ7Z7H3 387 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 MICU3Q86XE3 530 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 SPICE1Q8N0Z3 855 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 FAM43AQ8N2R8 423 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 TMTC2Q8N394 836 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 SVOPQ8N4V2 548 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 LPAR1Q92633 364 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 ALKBH8Q96BT7 664 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 CHMP4CQ96CF2 233 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 ZNF274Q96GC6 653 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 MAP3K14Q99558 947 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 FBXO28Q9NVF7 368 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 PARP2Q9UGN5 583 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 MAD2L2Q9UI95 211 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 AGTPBP1Q9UPW5 1226 aa6.04□□□□□ -1.44
HERPUD1-207ENST00000563781 THSD7BQ9C0I4 1608 aa6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 FRMPD2Q68DX3 1309 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 WDR33Q9C0J8 1336 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 ELOA3CA0A087WX78 387 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-207ENST00000563781 ELOA3DA6NLF2 546 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms