RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 DISP1Q96F81 1524 aa5.16□□□□□ -1.58
HERC1-215ENST00000561436 ARID1BQ8NFD5 2236 aaPredicted RBP5.16□□□□□ -1.58
HERC1-215ENST00000561436 LMTK3Q96Q04 1460 aa5.15□□□□□ -1.58
HERC1-215ENST00000561436 PDE8AO60658 829 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 C6orf222P0C671 652 aaPredicted RBP5.15□□□□□ -1.59
HERC1-215ENST00000561436 IGFBP6P24592 240 aaPredicted RBP5.15□□□□□ -1.59
HERC1-215ENST00000561436 STAT5AP42229 794 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 GUCY1A3Q02108 690 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 TMEM62Q0P6H9 643 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 KIZQ2M2Z5 673 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 LCE4AQ5TA78 99 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 CNNM4Q6P4Q7 775 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 KRT26Q7Z3Y9 468 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 DDX53Q86TM3 631 aaKnown RBP5.15□□□□□ -1.59
HERC1-215ENST00000561436 LRRTM3Q86VH5 581 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 RBM12BQ8IXT5 1001 aaKnown RBP5.15□□□□□ -1.59
HERC1-215ENST00000561436 SYT8Q8NBV8 401 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 GSTCDQ8NEC7 633 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 ZSCAN18Q8TBC5 510 aaPredicted RBP5.15□□□□□ -1.59
HERC1-215ENST00000561436 DACT3Q96B18 629 aaPredicted RBP5.15□□□□□ -1.59
HERC1-215ENST00000561436 DDX11Q96FC9 970 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 TMEM169Q96HH4 297 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 PWWP2AQ96N64 755 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 PALD1Q9ULE6 856 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 TRAF6Q9Y4K3 522 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 IRS2Q9Y4H2 1338 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 CUL7Q14999 1698 aa5.15□□□□□ -1.59
HERC1-215ENST00000561436 GSTA4O15217 222 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 NPTXRO95502 500 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 VIL1P09327 827 aaKnown RBP5.14□□□□□ -1.59
HERC1-215ENST00000561436 BMP7P18075 431 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 AFF3P51826 1226 aaKnown RBP5.14□□□□□ -1.59
HERC1-215ENST00000561436 NEK4P51957 841 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 ZNF385BQ569K4 471 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 FAM47CQ5HY64 1035 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 ZC3H7AQ8IWR0 971 aaKnown RBP5.14□□□□□ -1.59
HERC1-215ENST00000561436 NETO2Q8NC67 525 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 SMARCC2Q8TAQ2 1214 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 SLC7A14Q8TBB6 771 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 PEX11GQ96HA9 241 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 KCNJ15Q99712 375 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 TRIM39Q9HCM9 518 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 PCDH12Q9NPG4 1184 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 MCM8Q9UJA3 840 aa5.14□□□□□ -1.59
HERC1-215ENST00000561436 HECW2Q9P2P5 1572 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.13□□□□□ -1.59
HERC1-215ENST00000561436 BTBD11A6QL63 1104 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 RFXAPO00287 272 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 TRIM13O60858 407 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 CRTAMO95727 393 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 C8BP07358 591 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 COL6A2P12110 1019 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 STAT3P40763 770 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 FOXO4P98177 505 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 PAK1Q13153 545 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 SMAD4Q13485 552 aaKnown RBP5.13□□□□□ -1.59
HERC1-215ENST00000561436 LBX2Q6XYB7 198 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 MILR1Q7Z6M3 343 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 TSPAN17Q96FV3 270 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 CLUHP3Q96NS8 147 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 FAN1Q9Y2M0 1017 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 NPFFR2Q9Y5X5 522 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 TTBK1Q5TCY1 1321 aaPredicted RBP5.13□□□□□ -1.59
HERC1-215ENST00000561436 NEO1Q92859 1461 aa5.13□□□□□ -1.59
HERC1-215ENST00000561436 IQGAP2Q13576 1575 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 FAM47E-STBD1D6RA91 191 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 FFAR3O14843 346 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 DNAJC8O75937 253 aaPredicted RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 PFKLP17858 780 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 ST5P78524 1137 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 LSAMPQ13449 338 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 SART3Q15020 963 aaKnown RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 CFAP100Q494V2 611 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 TCERG1LQ5VWI1 586 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 DDX46Q7L014 1031 aaKnown RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 DCP2Q8IU60 420 aaKnown RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 TP53I13Q8NBR0 393 aaPredicted RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 ARRDC4Q8NCT1 418 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 ZNF526Q8TF50 670 aaPredicted RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 DDX1Q92499 740 aaKnown RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 CDIP1Q9H305 208 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 RBPJLQ9UBG7 517 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 NUDT5Q9UKK9 219 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 COA3Q9Y2R0 106 aaPredicted RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 PCDHA9Q9Y5H5 950 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 TNPO3Q9Y5L0 923 aaKnown RBP5.12□□□□□ -1.59
HERC1-215ENST00000561436 PMF1-BGLAPU3KQ54 211 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 POGZQ7Z3K3 1410 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 PTPRMP28827 1452 aa5.12□□□□□ -1.59
HERC1-215ENST00000561436 KIF13AQ9H1H9 1805 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 ADAMTS20P59510 1910 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 TCRBV16S1A1N1A0A5B0 115 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 GSG1L2A8MUP6 293 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 RASGRP1O95267 797 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 LTFP02788 710 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 INHBBP09529 407 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 JMJD7P0C870 316 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 NCAM1P13591 858 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 SDSP20132 328 aa5.11□□□□□ -1.59
HERC1-215ENST00000561436 GRK2P25098 689 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms