RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SLC28A3Q9HAS3 691 aa18.28■□□□□ 0.52
LMX1B-204ENST00000561065 JADE2Q9NQC1 790 aa18.28■□□□□ 0.52
LMX1B-204ENST00000561065 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
LMX1B-204ENST00000561065 GSTTP1A0A1W2PQM5 241 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 TCF7P36402 384 aaPredicted RBP18.27■□□□□ 0.52
LMX1B-204ENST00000561065 ADCY7P51828 1080 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 CNKSR3Q6P9H4 555 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 SPRED2Q7Z698 418 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 HERC6Q8IVU3 1022 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 FBXL16Q8N461 479 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 LMBR1Q8WVP7 490 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 ATP6V0A1Q93050 837 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 SETD4Q9NVD3 440 aa18.27■□□□□ 0.52
LMX1B-204ENST00000561065 hCG_1984214I3L0E3 225 aa18.26■□□□□ 0.51
LMX1B-204ENST00000561065 THPOP40225 353 aa18.26■□□□□ 0.51
LMX1B-204ENST00000561065 MKRN4PQ13434 485 aaPredicted RBP18.26■□□□□ 0.51
LMX1B-204ENST00000561065 PKN1Q16512 942 aa18.26■□□□□ 0.51
LMX1B-204ENST00000561065 PFKFB3Q16875 520 aaPredicted RBP18.26■□□□□ 0.51
LMX1B-204ENST00000561065 ZNF713Q8N859 430 aaPredicted RBP18.26■□□□□ 0.51
LMX1B-204ENST00000561065 CDHR1Q96JP9 859 aa18.26■□□□□ 0.51
LMX1B-204ENST00000561065 ZNF215Q9UL58 517 aaPredicted RBP18.26■□□□□ 0.51
LMX1B-204ENST00000561065 XIRP2A4UGR9 3374 aa18.26■□□□□ 0.51
LMX1B-204ENST00000561065 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 SMCO2A6NFE2 343 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 EPOPA6NHQ4 379 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 DLL1O00548 723 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 PPFIA3O75145 1194 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 PARNO95453 639 aaKnown RBP18.25■□□□□ 0.51
LMX1B-204ENST00000561065 CTSHP09668 335 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 SCG2P13521 617 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 SREBF1P36956 1147 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 NTRK3Q16288 839 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 TEX2Q8IWB9 1127 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 GIMAP8Q8ND71 665 aaPredicted RBP18.25■□□□□ 0.51
LMX1B-204ENST00000561065 PHOSPHO2Q8TCD6 241 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 PHKBQ93100 1093 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 PCYT2Q99447 389 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 GAS2L1Q99501 681 aaPredicted RBP18.25■□□□□ 0.51
LMX1B-204ENST00000561065 MXRA8Q9BRK3 442 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 PRDM6Q9NQX0 595 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 KCNH7Q9NS40 1196 aa18.25■□□□□ 0.51
LMX1B-204ENST00000561065 ARP10275 920 aa18.24■□□□□ 0.51
LMX1B-204ENST00000561065 MARK3P27448 753 aa18.24■□□□□ 0.51
LMX1B-204ENST00000561065 ITGB3BPQ13352 177 aaPredicted RBP18.24■□□□□ 0.51
LMX1B-204ENST00000561065 AP3B2Q13367 1082 aa18.24■□□□□ 0.51
LMX1B-204ENST00000561065 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
LMX1B-204ENST00000561065 CRYGNQ8WXF5 182 aa18.24■□□□□ 0.51
LMX1B-204ENST00000561065 EHMT1Q9H9B1 1298 aa18.24■□□□□ 0.51
LMX1B-204ENST00000561065 EMSYQ7Z589 1322 aa18.24■□□□□ 0.51
LMX1B-204ENST00000561065 WDR81Q562E7 1941 aa18.24■□□□□ 0.51
LMX1B-204ENST00000561065 RSPH10B2B2RC85 870 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 LGR5O75473 907 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 RSPH10BP0C881 870 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 KCNJ6P48051 423 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 ARHGAP4P98171 946 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 TAP1Q03518 808 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 RUFY4Q6ZNE9 571 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 SEPT1Q8WYJ6 367 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 COL25A1Q9BXS0 654 aaPredicted RBP18.23■□□□□ 0.51
LMX1B-204ENST00000561065 CERS4Q9HA82 394 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 NCOA5Q9HCD5 579 aaKnown RBP18.23■□□□□ 0.51
LMX1B-204ENST00000561065 JPH1Q9HDC5 661 aaPredicted RBP18.23■□□□□ 0.51
LMX1B-204ENST00000561065 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 LOXHD1Q8IVV2 1947 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 MUC3AQ02505 3323 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 PRRC2BQ5JSZ5 2229 aaKnown RBP18.23■□□□□ 0.51
LMX1B-204ENST00000561065 ESYT2A0FGR8 921 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 RFXAPO00287 272 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 FOSP01100 380 aaPredicted RBP18.23■□□□□ 0.51
LMX1B-204ENST00000561065 EVCP57679 992 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 CEP55Q53EZ4 464 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 JAKMIP3Q5VZ66 844 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
LMX1B-204ENST00000561065 DBF4BQ8NFT6 615 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 ZBTB10Q96DT7 871 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 ZMYND12Q9H0C1 365 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 GLT8D2Q9H1C3 349 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 ZSWIM6Q9HCJ5 1215 aa18.23■□□□□ 0.51
LMX1B-204ENST00000561065 AGO4Q9HCK5 861 aaKnown RBP18.23■□□□□ 0.51
LMX1B-204ENST00000561065 IGLV3-22A0A075B6J6 115 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 ABHD14A-ACY1A0A1B0GW23 586 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 FAM86B1E9PN63 330 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 MAFGO15525 162 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 PRPF3O43395 683 aaKnown RBP18.22■□□□□ 0.51
LMX1B-204ENST00000561065 FAM86B2P0C5J1 330 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 PDIA3P30101 505 aaKnown RBP18.22■□□□□ 0.51
LMX1B-204ENST00000561065 PPFIA1Q13136 1202 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 PLEKHG4Q58EX7 1191 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 RUFY3Q7L099 469 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 RASGRP4Q8TDF6 673 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 TM6SF1Q9BZW5 370 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 ERAP1Q9NZ08 941 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 SLC9A2Q9UBY0 812 aa18.22■□□□□ 0.51
LMX1B-204ENST00000561065 NFASCO94856 1347 aa18.21■□□□□ 0.51
LMX1B-204ENST00000561065 NRCAMQ92823 1304 aa18.21■□□□□ 0.51
LMX1B-204ENST00000561065 MEIS1O00470 390 aa18.21■□□□□ 0.51
LMX1B-204ENST00000561065 TLL1O43897 1013 aa18.21■□□□□ 0.51
LMX1B-204ENST00000561065 CAND2O75155 1236 aa18.21■□□□□ 0.51
LMX1B-204ENST00000561065 GJB5O95377 273 aa18.21■□□□□ 0.51
LMX1B-204ENST00000561065 IGFBP4P22692 258 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms