RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 PRKD3O94806 890 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 LTFP02788 710 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 S100BP04271 92 aaPredicted RBP7.64□□□□□ -1.19
MARK3-220ENST00000560417 GJA4P35212 333 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 PHC1P78364 1004 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 SMAD3P84022 425 aaKnown RBP7.64□□□□□ -1.19
MARK3-220ENST00000560417 TUSC3Q13454 348 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 NR1I3Q14994 352 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 SMAD2Q15796 467 aaKnown RBP7.64□□□□□ -1.19
MARK3-220ENST00000560417 CC2D1AQ6P1N0 951 aaPredicted RBP7.64□□□□□ -1.19
MARK3-220ENST00000560417 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.64□□□□□ -1.19
MARK3-220ENST00000560417 C11orf74Q86VG3 221 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 CNTD1Q8N815 330 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 KIAA1958Q8N8K9 716 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 TTLL11Q8NHH1 800 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 KIRREL1Q96J84 757 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 CEP89Q96ST8 783 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 ELF4Q99607 663 aaPredicted RBP7.64□□□□□ -1.19
MARK3-220ENST00000560417 KCNH7Q9NS40 1196 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 THRAP3Q9Y2W1 955 aaKnown RBP7.64□□□□□ -1.19
MARK3-220ENST00000560417 PCDHB4Q9Y5E5 795 aa7.64□□□□□ -1.19
MARK3-220ENST00000560417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.63□□□□□ -1.19
MARK3-220ENST00000560417 F8W031 263 aaPredicted RBP7.63□□□□□ -1.19
MARK3-220ENST00000560417 ZBTB7AO95365 584 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 C4BPAP04003 597 aaKnown RBP7.63□□□□□ -1.19
MARK3-220ENST00000560417 PTPN1P18031 435 aaKnown RBP7.63□□□□□ -1.19
MARK3-220ENST00000560417 SLC9A1P19634 815 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 SDHBP21912 280 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 SDHAP31040 664 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 KIF11P52732 1056 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 ERVK-21P61565 698 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 TERF2Q15554 542 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 ZNF174Q15697 407 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 ODR4Q5SWX8 454 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 GPR158Q5T848 1215 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 RPTNQ6XPR3 784 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 MILR1Q7Z6M3 343 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 TRIM48Q8IWZ4 208 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 CLRN3Q8NCR9 226 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 ARRDC4Q8NCT1 418 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 SLC5A5Q92911 643 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 TSPAN17Q96FV3 270 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 VTA1Q9NP79 307 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 KLHL14Q9P2G3 628 aa7.63□□□□□ -1.19
MARK3-220ENST00000560417 ACOT7O00154 380 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 BUB1BO60566 1050 aaPredicted RBP7.62□□□□□ -1.19
MARK3-220ENST00000560417 HIP1RO75146 1068 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 ALDH1L1O75891 902 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 MPOP05164 745 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 SESN3P58005 492 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 FAPQ12884 760 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 SLC9A5Q14940 896 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 BROXQ5VW32 411 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 IQSEC1Q6DN90 963 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 MENTQ9BUN1 341 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 CCDC8Q9H0W5 538 aaPredicted RBP7.62□□□□□ -1.19
MARK3-220ENST00000560417 SLC6A17Q9H1V8 727 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 ACSS2Q9NR19 701 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 HCFC2Q9Y5Z7 792 aa7.62□□□□□ -1.19
MARK3-220ENST00000560417 OAS3Q9Y6K5 1087 aaKnown RBP7.62□□□□□ -1.19
MARK3-220ENST00000560417 GABRDO14764 452 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 CYP17A1P05093 508 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 MAPKAPK2P49137 400 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 YBX1P67809 324 aaKnown RBP7.61□□□□□ -1.19
MARK3-220ENST00000560417 ITKQ08881 620 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 LRRC32Q14392 662 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 DDB1Q16531 1140 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 INAVAQ3KP66 663 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 ADGRF1Q5T601 910 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 SYDE2Q5VT97 1194 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 BTBD8Q5XKL5 378 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 EP400NLQ6ZTU2 488 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 MIB1Q86YT6 1006 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 PASD1Q8IV76 773 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 CBARPQ8N350 705 aaPredicted RBP7.61□□□□□ -1.19
MARK3-220ENST00000560417 PCIF1Q9H4Z3 704 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 ZMAT4Q9H898 229 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 ZFP64Q9NPA5 681 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 TRHDEQ9UKU6 1024 aa7.61□□□□□ -1.19
MARK3-220ENST00000560417 RASSF10A6NK89 507 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 NUDT19A8MXV4 375 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 PARNO95453 639 aaKnown RBP7.6□□□□□ -1.19
MARK3-220ENST00000560417 PTX3P26022 381 aaPredicted RBP7.6□□□□□ -1.19
MARK3-220ENST00000560417 FNTBP49356 437 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 PRR5P85299 388 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 RAB3GAP1Q15042 981 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 TTF1Q15361 905 aaPredicted RBP7.6□□□□□ -1.19
MARK3-220ENST00000560417 PLEKHN1Q494U1 663 aaPredicted RBP7.6□□□□□ -1.19
MARK3-220ENST00000560417 CATSPEREQ5SY80 951 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 ESRP1Q6NXG1 681 aaKnown RBP7.6□□□□□ -1.19
MARK3-220ENST00000560417 IRF2BP1Q8IU81 584 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 ZNF610Q8N9Z0 462 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 MTMR8Q96EF0 704 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 C16orf92Q96LL3 132 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 RIC8BQ9NVN3 520 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 HSPBP1Q9NZL4 362 aa7.6□□□□□ -1.19
MARK3-220ENST00000560417 OR14I1A6ND48 311 aa7.59□□□□□ -1.19
MARK3-220ENST00000560417 GLI1P08151 1106 aa7.59□□□□□ -1.19
MARK3-220ENST00000560417 FAHP16930 419 aa7.59□□□□□ -1.19
MARK3-220ENST00000560417 HERVK_113P62684 666 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms