RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 ZNF589Q86UQ0 364 aaPredicted RBP6.85□□□□□ -1.31
USP3-215ENST00000559771 HERVK_113Q902F9 699 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 TIFAQ96CG3 184 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 TMEM47Q9BQJ4 181 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 NOC4LQ9BVI4 516 aaKnown RBP6.85□□□□□ -1.31
USP3-215ENST00000559771 IL23AQ9NPF7 189 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 TCP11L1Q9NUJ3 509 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 YBX2Q9Y2T7 364 aaKnown RBP6.85□□□□□ -1.31
USP3-215ENST00000559771 Q9Y3F1 56 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 CTDP1Q9Y5B0 961 aaPredicted RBP6.85□□□□□ -1.31
USP3-215ENST00000559771 SCN10AQ9Y5Y9 1956 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 PTPRSQ13332 1948 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 LAMA4Q16363 1823 aa6.85□□□□□ -1.31
USP3-215ENST00000559771 FRMPD2Q68DX3 1309 aaPredicted RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 TANC1Q9C0D5 1861 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 RANBP6O60518 1105 aaKnown RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 SLC3A2P08195 630 aaKnown RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 SNHG28P0DPA3 235 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 HSPD1P10809 573 aaKnown RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 PDHBP11177 359 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 ADD1P35611 737 aaKnown RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 ALDH5A1P51649 535 aaPredicted RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 RRP1P56182 461 aaKnown RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 PURAQ00577 322 aaKnown RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 BAATQ14032 418 aaPredicted RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 LRRFIP1Q32MZ4 808 aaKnown RBP6.84□□□□□ -1.31
USP3-215ENST00000559771 DUSP28Q4G0W2 176 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 IQSEC1Q6DN90 963 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 NSMFQ6X4W1 530 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 SLC30A10Q6XR72 485 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 TBC1D10CQ8IV04 446 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 TMEM199Q8N511 208 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 PPP1R13LQ8WUF5 828 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 DCAF4Q8WV16 495 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 VTI1AQ96AJ9 217 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 EVI5LQ96CN4 794 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 CRBNQ96SW2 442 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 HIPK3Q9H422 1215 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 PRDM12Q9H4Q4 367 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 SPC25Q9HBM1 224 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 VTA1Q9NP79 307 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 HELLSQ9NRZ9 838 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 CCPG1Q9ULG6 757 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 MTMR7Q9Y216 660 aa6.84□□□□□ -1.31
USP3-215ENST00000559771 ZMYM6O95789 1325 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 CABYRO75952 493 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 ARIH2O95376 493 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 TOP1P11387 765 aaKnown RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 MYOGP15173 224 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 EDNRBP24530 442 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 RABGGTBP53611 331 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 CCL23P55773 120 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 HAND2P61296 217 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 ZNF543Q08ER8 600 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 IKQ13123 557 aaPredicted RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 NMIQ13287 307 aaPredicted RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 HDAC1Q13547 482 aaPredicted RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 CCDC96Q2M329 555 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 MCMDC2Q4G0Z9 681 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 ANKRD45Q5TZF3 282 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 SYDE2Q5VT97 1194 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 PSRC1Q6PGN9 363 aaPredicted RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 KIAA1211Q6ZU35 1233 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 NOL8Q76FK4 1167 aaKnown RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 OTOP2Q7RTS6 562 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 TBC1D5Q92609 795 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 COPS5Q92905 334 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 SCLYQ96I15 445 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 CTAGE1Q96RT6 745 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 ALDH8A1Q9H2A2 487 aaPredicted RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 NKX2-4Q9H2Z4 354 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 CPVLQ9H3G5 476 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 GPCPD1Q9NPB8 672 aa6.83□□□□□ -1.32
USP3-215ENST00000559771 TRMT13Q9NUP7 481 aaKnown RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 ISY1Q9ULR0 285 aaKnown RBP6.83□□□□□ -1.32
USP3-215ENST00000559771 NEDD4P46934 1319 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 KIAA1217Q5T5P2 1943 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 LOC102724159A0A0B4J2E5 919 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 FGBP02675 491 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 CYP2C9P11712 490 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 RNF144AP50876 292 aaPredicted RBP6.82□□□□□ -1.32
USP3-215ENST00000559771 RPS6P62753 249 aaKnown RBP6.82□□□□□ -1.32
USP3-215ENST00000559771 TTLL4Q14679 1199 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 GPNMBQ14956 572 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 PWP2Q15269 919 aaKnown RBP6.82□□□□□ -1.32
USP3-215ENST00000559771 RRP12Q5JTH9 1297 aaKnown RBP6.82□□□□□ -1.32
USP3-215ENST00000559771 AKNAD1Q5T1N1 836 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 BTBD6Q96KE9 485 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 SEZ6LQ9BYH1 1024 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 WDR11Q9BZH6 1224 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 AP5M1Q9H0R1 490 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 IL25Q9H293 177 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 COL20A1Q9P218 1284 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 DYRK1BQ9Y463 629 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 TET1Q8NFU7 2136 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 TTC28Q96AY4 2481 aa6.82□□□□□ -1.32
USP3-215ENST00000559771 TNKSO95271 1327 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 CCDC171Q6TFL3 1326 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms