RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 RGS17Q9UGC6 210 aaPredicted RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 LTBP4Q8N2S1 1624 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 CNTNAP5Q8WYK1 1306 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 ATP2C2O75185 946 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 FDPSP14324 419 aaKnown RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 MOB2Q70IA6 237 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 CCDC91Q7Z6B0 441 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 DYDC2Q96IM9 177 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 IL17RBQ9NRM6 502 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 POTECB2RU33 542 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 AKR1B15C9JRZ8 316 aaPredicted RBP11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 E9PMD0 336 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 STXBP3O00186 592 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 DYNC1LI2O43237 492 aaPredicted RBP11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 PHF20Q9BVI0 1012 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 FAM207AQ9NSI2 230 aaPredicted RBP11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 KIF4AO95239 1232 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 HNRNPH2P55795 449 aaKnown RBP11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 FAM76AQ8TAV0 307 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 GOLGA5Q8TBA6 731 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 AFAP1L1Q8TED9 768 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 TRPM3Q9HCF6 1732 aaPredicted RBP11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 EFCAB8A8MWE9 144 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 NFKBIEO00221 500 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 PRPF6O94906 941 aaKnown RBP11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 CTDNEP1O95476 244 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 YY1P25490 414 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 QARSP47897 775 aaKnown RBP11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 YARSP54577 528 aaKnown RBP11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 ARHGAP44Q17R89 818 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 TKFCQ3LXA3 575 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 FANCLQ9NW38 375 aa11.68□□□□□ -0.54
CARMIL3-202ENST00000559694 K7ERI5 159 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 CLIC2O15247 247 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 GGPS1O95749 300 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 GAP43P17677 238 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 PEX3P56589 373 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 MORC3Q14149 939 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 SESTD1Q86VW0 696 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 CEP57Q86XR8 500 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 CNGA4Q8IV77 575 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 RABEP2Q9H5N1 569 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 PRKAG2Q9UGJ0 569 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 CPA4Q9UI42 421 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 ZNF541Q9H0D2 1346 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 OPA1O60313 960 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 STX10O60499 249 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 SEC31AO94979 1220 aaKnown RBP11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 P4HBP07237 508 aaKnown RBP11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 KRT9P35527 623 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 KIF5AQ12840 1032 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 CYFIP1Q7L576 1253 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 ZNF668Q96K58 619 aaPredicted RBP11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 SH2D3AQ9BRG2 576 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 PPP1R9AQ9ULJ8 1098 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 PCDHA10Q9Y5I2 948 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 CASP1P29466 404 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 GJC1P36383 396 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 IFFO1Q0D2I5 559 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 CHST13Q8NET6 341 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 KIAA1683Q9H0B3 1180 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 PCIF1Q9H4Z3 704 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 RGL1Q9NZL6 768 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 CXCL11O14625 94 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 C6orf222P0C671 652 aaPredicted RBP11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 NR2F2P24468 414 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 RASGRP2Q7LDG7 609 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 KCNB2Q92953 911 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 GMCL1Q96IK5 515 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 TAAR1Q96RJ0 339 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 NAA15Q9BXJ9 866 aaKnown RBP11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 ZMYND12Q9H0C1 365 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 ZNF302Q9NR11 478 aa11.67□□□□□ -0.54
CARMIL3-202ENST00000559694 TMEM191BP0C7N4 346 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 TNFAIP3P21580 790 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 SFNP31947 248 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 CLCN6P51797 869 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 OSTNP61366 133 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 VGLL4Q14135 290 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 ARID5BQ14865 1188 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 ABI1Q8IZP0 508 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 GTF3C2Q8WUA4 911 aaPredicted RBP11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 PAGE5Q96GU1 130 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 CCDC113Q9H0I3 377 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 EMILIN3Q9NT22 766 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 SLC9A2Q9UBY0 812 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 GNA14O95837 355 aa11.66□□□□□ -0.54
CARMIL3-202ENST00000559694 ICAM1P05362 532 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms