RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 RMDN3Q96TC7 470 aa10.5□□□□□ -0.73
SNRPA1-208ENST00000559686 PHF7Q9BWX1 381 aaPredicted RBP10.5□□□□□ -0.73
SNRPA1-208ENST00000559686 TSHZ2Q9NRE2 1034 aa10.5□□□□□ -0.73
SNRPA1-208ENST00000559686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.5□□□□□ -0.73
SNRPA1-208ENST00000559686 SUPT16HQ9Y5B9 1047 aaKnown RBP10.5□□□□□ -0.73
SNRPA1-208ENST00000559686 PLXNA4Q9HCM2 1894 aa10.5□□□□□ -0.73
SNRPA1-208ENST00000559686 SMIM10L2AP0DMW4 78 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 SMIM10L2BP0DMW5 78 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 MMRN1Q13201 1228 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 CBX2Q14781 532 aaPredicted RBP10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 HSDL1Q3SXM5 330 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 ARHGEF16Q5VV41 709 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 SPNS2Q8IVW8 549 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 EFHBQ8N7U6 833 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 TMEM105Q8N8V8 129 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 PPTC7Q8NI37 304 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 SYTL5Q8TDW5 730 aaPredicted RBP10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 NSUN6Q8TEA1 469 aaKnown RBP10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 PPP2R3CQ969Q6 453 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 RIPOR3Q96MK2 946 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 SPATA33Q96N06 139 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 TMEM47Q9BQJ4 181 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 SMOC2Q9H3U7 446 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 ECHDC1Q9NTX5 307 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 PLAGL2Q9UPG8 496 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 RWDD3Q9Y3V2 267 aa10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 MRPL42Q9Y6G3 142 aaKnown RBP10.49□□□□□ -0.73
SNRPA1-208ENST00000559686 WDR87Q6ZQQ6 2873 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 GGPS1O95749 300 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 ITGB1P05556 798 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 ZFYP08048 801 aaPredicted RBP10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 GHRP10912 638 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 PDHBP11177 359 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 TOP1P11387 765 aaKnown RBP10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 ICAM3P32942 547 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 NBL1P41271 181 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 ZNF543Q08ER8 600 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 COASYQ13057 564 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 EFCAB3Q8N7B9 438 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 KLHL23Q8NBE8 558 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 KREMEN2Q8NCW0 462 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 MICAL1Q8TDZ2 1067 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 POF1BQ8WVV4 589 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 LRRCC1Q9C099 1032 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 RNPEPQ9H4A4 650 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 TLE6Q9H808 572 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 SETD4Q9NVD3 440 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 DOCK5Q9H7D0 1870 aa10.48□□□□□ -0.73
SNRPA1-208ENST00000559686 MYH6P13533 1939 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 H3BRB1 525 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 MYSM1Q5VVJ2 828 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 SPPL3Q8TCT6 385 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 APBB2Q92870 758 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 CLP1Q92989 425 aaKnown RBP10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 IWS1Q96ST2 819 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 C16orf70Q9BSU1 422 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 TUT1Q9H6E5 874 aaKnown RBP10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 BCAS3Q9H6U6 928 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 PXMP2Q9NR77 195 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 FRYLO94915 3013 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 WDR19Q8NEZ3 1342 aa10.47□□□□□ -0.73
SNRPA1-208ENST00000559686 DNAH14Q0VDD8 3507 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 DHX16O60231 1041 aaKnown RBP10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 PPFIA4O75335 1185 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 CFBP00751 764 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 NR3C2P08235 984 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 GATMP50440 423 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 ARHGAP4P98171 946 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 SP2Q02086 613 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 CDC37Q16543 378 aaPredicted RBP10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 CELF3Q5SZQ8 465 aaKnown RBP10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 UTP14CQ5TAP6 766 aaKnown RBP10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 LLGL2Q6P1M3 1020 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 VN1R2Q8NFZ6 395 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.734e-9■■■□□ 16.8
SNRPA1-208ENST00000559686 RMDN1Q96DB5 314 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 MLXIPQ9HAP2 919 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 CDH22Q9UJ99 828 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 PNMA2Q9UL42 364 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
SNRPA1-208ENST00000559686 ABCB11O95342 1321 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 CCDC171Q6TFL3 1326 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 ENPP3O14638 875 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 DGKIO75912 1065 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 BRD1O95696 1058 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 CHRNA1P02708 482 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 LGALS2P05162 132 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 NOVP48745 357 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 SPOUT1Q5T280 376 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 VPS53Q5VIR6 699 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 DGLUCYQ7Z3D6 616 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 RGS22Q8NE09 1264 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 KCNG4Q8TDN1 519 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 ZNF689Q96CS4 500 aaPredicted RBP10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 ZKSCAN3Q9BRR0 538 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms