RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 DOCK1Q14185 1865 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 PARP14Q460N5 1801 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 CCDC122Q5T0U0 273 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 ZNF662Q6ZS27 426 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 KIAA1328Q86T90 577 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 CCDC84Q86UT8 332 aaPredicted RBP12.24□□□□□ -0.45
SPG11-217ENST00000559511 SMAP1Q8IYB5 467 aaPredicted RBP12.24□□□□□ -0.45
SPG11-217ENST00000559511 CCDC170Q8IYT3 715 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 FAM20AQ96MK3 541 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 EIF3CQ99613 913 aaKnown RBP12.24□□□□□ -0.45
SPG11-217ENST00000559511 LACRTQ9GZZ8 138 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 KCTD10Q9H3F6 313 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 VCPKMTQ9H867 229 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 MMRN2Q9H8L6 949 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 ARGLU1Q9NWB6 273 aaPredicted RBP12.24□□□□□ -0.45
SPG11-217ENST00000559511 PLAGL2Q9UPG8 496 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 COL4A3BPQ9Y5P4 624 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 MYH10P35580 1976 aa12.24□□□□□ -0.45
SPG11-217ENST00000559511 ASTN2O75129 1339 aaPredicted RBP12.23□□□□□ -0.45
SPG11-217ENST00000559511 PITPNM2Q9BZ72 1349 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 IGLV3-22A0A075B6J6 115 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 PHF20L1A8MW92 1017 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 FZD9O00144 591 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 SEC31AO94979 1220 aaKnown RBP12.23□□□□□ -0.45
SPG11-217ENST00000559511 KRT18P05783 430 aaKnown RBP12.23□□□□□ -0.45
SPG11-217ENST00000559511 CYP3A4P08684 503 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 HNRNPH3P31942 346 aaKnown RBP12.23□□□□□ -0.45
SPG11-217ENST00000559511 CASP5P51878 434 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 CYP27A1Q02318 531 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 CYP4A11Q02928 519 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 KCNMA1Q12791 1236 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 TUBB2AQ13885 445 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 GIT2Q14161 759 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 ZYXQ15942 572 aaKnown RBP12.23□□□□□ -0.45
SPG11-217ENST00000559511 CCDC174Q6PII3 467 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 SLC30A10Q6XR72 485 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 CEP112Q8N8E3 955 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 ERMNQ8TAM6 284 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 JAKMIP2Q96AA8 810 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 IQCDQ96DY2 449 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 TUBB2BQ9BVA1 445 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 PARD6BQ9BYG5 372 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 ZHX3Q9H4I2 956 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 EMILIN3Q9NT22 766 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 ARHGAP20Q9P2F6 1191 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 EML1O00423 815 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 ASNSP08243 561 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 TMCO3Q6UWJ1 677 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 GPIHBP1Q8IV16 184 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 KRT222Q8N1A0 295 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 SYT2Q8N9I0 419 aaPredicted RBP12.23□□□□□ -0.45
SPG11-217ENST00000559511 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 SMCR8Q8TEV9 937 aaPredicted RBP12.23□□□□□ -0.45
SPG11-217ENST00000559511 BAP1Q92560 729 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 REEP2Q9BRK0 252 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 TANGO6Q9C0B7 1094 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 GJA3Q9Y6H8 435 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 DUSP10Q9Y6W6 482 aa12.23□□□□□ -0.45
SPG11-217ENST00000559511 LRRC53A6NM62 1247 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 ENC1O14682 589 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 CFBP00751 764 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 ZNF76P36508 570 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 CCDC40Q4G0X9 1142 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 TBC1D10BQ4KMP7 808 aaPredicted RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 TRAPPC11Q7Z392 1133 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 KRT26Q7Z3Y9 468 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 CEP63Q96MT8 703 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 WDR18Q9BV38 432 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 RANBP17Q9H2T7 1088 aaKnown RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 SH2D4AQ9H788 454 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 HDAC6Q9UBN7 1215 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 MYO6Q9UM54 1294 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 DNM3Q9UQ16 869 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 UTRNP46939 3433 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 PLA2G6O60733 806 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 ATP1A1P05023 1023 aaKnown RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 TNFAIP1Q13829 316 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 BMS1Q14692 1282 aaKnown RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 WHAMMP3Q1A5X7 153 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 CC2D1AQ6P1N0 951 aaPredicted RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 RRAGAQ7L523 313 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 SFR1Q86XK3 245 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 ZC3H3Q8IXZ2 948 aaKnown RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 CHURC1Q8WUH1 139 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 CCDC42Q96M95 316 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 EIF2AK1Q9BQI3 630 aaKnown RBP12.22□□□□□ -0.45
SPG11-217ENST00000559511 BCAS3Q9H6U6 928 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 ANKZF1Q9H8Y5 726 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 RGL1Q9NZL6 768 aa12.22□□□□□ -0.45
SPG11-217ENST00000559511 PHIPQ8WWQ0 1821 aa12.21□□□□□ -0.45
SPG11-217ENST00000559511 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.45
SPG11-217ENST00000559511 KRT86O43790 486 aa12.21□□□□□ -0.45
SPG11-217ENST00000559511 IPO7O95373 1038 aaKnown RBP12.21□□□□□ -0.45
SPG11-217ENST00000559511 RSPH10BP0C881 870 aa12.21□□□□□ -0.45
SPG11-217ENST00000559511 HOXD13P35453 343 aa12.21□□□□□ -0.45
SPG11-217ENST00000559511 VAV2P52735 878 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms