RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NBPF12Q5TAG4 269 aaPredicted RBP5.36□□□□□ -1.55
SPG11-211ENST00000558561 DDX46Q7L014 1031 aaKnown RBP5.36□□□□□ -1.55
SPG11-211ENST00000558561 SPACA3Q8IXA5 215 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 MFSD4AQ8N468 514 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 TAB3Q8N5C8 712 aaPredicted RBP5.36□□□□□ -1.55
SPG11-211ENST00000558561 OR6P1Q8NGX9 317 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 KLHDC4Q8TBB5 520 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 NETO1Q8TDF5 533 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 RNF141Q8WVD5 230 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 SUCLG2Q96I99 432 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 USP44Q9H0E7 712 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 ZNF408Q9H9D4 720 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 MKNK2Q9HBH9 465 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 SCAF8Q9UPN6 1271 aaKnown RBP5.36□□□□□ -1.55
SPG11-211ENST00000558561 LTBP3Q9NS15 1303 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 SPEF2Q9C093 1822 aa5.36□□□□□ -1.55
SPG11-211ENST00000558561 SCN9AQ15858 1988 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 LTBP1Q14766 1721 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 HYAL3O43820 417 aaPredicted RBP5.35□□□□□ -1.55
SPG11-211ENST00000558561 ADAMTS4O75173 837 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 RAD17O75943 681 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 DDX58O95786 925 aaKnown RBP5.35□□□□□ -1.55
SPG11-211ENST00000558561 ZNF865P0CJ78 1059 aaPredicted RBP5.35□□□□□ -1.55
SPG11-211ENST00000558561 TNK2Q07912 1038 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 BNIP3Q12983 259 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 IFI16Q16666 785 aaKnown RBP5.35□□□□□ -1.55
SPG11-211ENST00000558561 LMBR1LQ6UX01 489 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 C22orf34Q6ZV56 151 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 RTKN2Q8IZC4 609 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 LINS1Q8NG48 757 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 TBC1D16Q8TBP0 767 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 DHRS1Q96LJ7 313 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 FBXL18Q96ME1 805 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 HSPA12BQ96MM6 686 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 DBNDD1Q9H9R9 158 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 FAM86C1Q9NVL1 165 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 PCDHB10Q9UN67 800 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 MINPP1Q9UNW1 487 aa5.35□□□□□ -1.55
SPG11-211ENST00000558561 IBTKQ9P2D0 1353 aaPredicted RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 ASTN2O75129 1339 aaPredicted RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 RNF123Q5XPI4 1314 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 CDHR2Q9BYE9 1310 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 TMEM265A0A087WTH1 108 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 WASH4PA8MWX3 477 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 C9IYK1 514 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 PPIP5K2O43314 1243 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 PLIN1O60240 522 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 TP53P04637 393 aaPredicted RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 ATP2B1P20020 1258 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 SPINK2P20155 84 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 CD96P40200 585 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 KIR3DL1P43629 444 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 CTSWP56202 376 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 LRRC24Q50LG9 513 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 TDRD10Q5VZ19 366 aaKnown RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 DPP8Q6V1X1 898 aaPredicted RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 PPFIBP1Q86W92 1011 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 DTX1Q86Y01 620 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 ANKRD44Q8N8A2 993 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 C19orf47Q8N9M1 422 aaKnown RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 DTWD2Q8NBA8 298 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 DHX38Q92620 1227 aaKnown RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 COX4I2Q96KJ9 171 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 PSMD1Q99460 953 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 ASPNQ9BXN1 380 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 RTFDC1Q9BY42 306 aaPredicted RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 PCMTD2Q9NV79 361 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 BSDC1Q9NW68 430 aaPredicted RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 SUCOQ9UBS9 1254 aaKnown RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 PRKAG3Q9UGI9 489 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 ZNF214Q9UL59 606 aaPredicted RBP5.34□□□□□ -1.55
SPG11-211ENST00000558561 PCDHAC2Q9Y5I4 1007 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 ST14Q9Y5Y6 855 aa5.34□□□□□ -1.55
SPG11-211ENST00000558561 DUOX1Q9NRD9 1551 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 RIC1Q4ADV7 1423 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 MYH3P11055 1940 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 RTL9Q8NET4 1388 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 SCO2A0A1W2PP80 73 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 KIAA1324LA8MWY0 1029 aaPredicted RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 H3BS24 57 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 GRM8O00222 908 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 PSMD14O00487 310 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 TOMM70O94826 608 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 VEGFAP15692 232 aaPredicted RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 RFX5P48382 616 aaPredicted RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 PMS1P54277 932 aaKnown RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 RNF4P78317 190 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 NEXNQ0ZGT2 675 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 SNW1Q13573 536 aaKnown RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 NBPF9Q3BBW0 867 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 AXDND1Q5T1B0 1012 aaPredicted RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 SPRED2Q7Z698 418 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 DNAJC5GQ8N7S2 189 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 PLA2G12BQ9BX93 195 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 DUSP15Q9H1R2 295 aaPredicted RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 TAF1DQ9H5J8 278 aaPredicted RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 BICC1Q9H694 974 aaKnown RBP5.33□□□□□ -1.56
SPG11-211ENST00000558561 SEMA3GQ9NS98 782 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 SMC4Q9NTJ3 1288 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 C9orf78Q9NZ63 289 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms