RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 UNC45AQ9H3U1 944 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 MLXIPQ9HAP2 919 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 JPH1Q9HDC5 661 aaPredicted RBP10.83□□□□□ -0.68
CUX1-216ENST00000558469 SLC9A2Q9UBY0 812 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 LRWD1Q9UFC0 647 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 TCEAL9Q9UHQ7 104 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 VAV3Q9UKW4 847 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 LOXHD1Q8IVV2 1947 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 HTTP42858 3142 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 ELP1O95163 1332 aa10.83□□□□□ -0.68
CUX1-216ENST00000558469 KAT6AQ92794 2004 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 GOLGA6L4A6NEF3 574 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 GOLGA6L22H0YM25 854 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 NKRFO15226 690 aaKnown RBP eCLIP10.82□□□□□ -0.685e-6■■□□□ 12.7
CUX1-216ENST00000558469 PRPF40AO75400 957 aaKnown RBP10.82□□□□□ -0.68
CUX1-216ENST00000558469 GH1P01241 217 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 AKR1A1P14550 325 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 CDC25AP30304 524 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 KRT76Q01546 638 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 ARHGAP1Q07960 439 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 SPIRE1Q08AE8 756 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 PPP2R5CQ13362 524 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 AXDND1Q5T1B0 1012 aaPredicted RBP10.82□□□□□ -0.68
CUX1-216ENST00000558469 MAP3K21Q5TCX8 1036 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 IGSF22Q8N9C0 903 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 TMEM87AQ8NBN3 555 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 LENG1Q96BZ8 264 aaPredicted RBP10.82□□□□□ -0.68
CUX1-216ENST00000558469 TELO2Q9Y4R8 837 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 SAMM50Q9Y512 469 aa10.82□□□□□ -0.68
CUX1-216ENST00000558469 PP2D1A8MPX8 630 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 EML1O00423 815 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 SEPT4O43236 478 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 DYNC1LI2O43237 492 aaPredicted RBP10.81□□□□□ -0.68
CUX1-216ENST00000558469 GADD45BO75293 160 aaPredicted RBP10.81□□□□□ -0.68
CUX1-216ENST00000558469 FARP2O94887 1054 aaPredicted RBP10.81□□□□□ -0.68
CUX1-216ENST00000558469 CCNE2O96020 404 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 ACTR2P61160 394 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 LAMC2Q13753 1193 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 PKN2Q16513 984 aaKnown RBP10.81□□□□□ -0.68
CUX1-216ENST00000558469 ZNF746Q6NUN9 644 aaPredicted RBP10.81□□□□□ -0.68
CUX1-216ENST00000558469 FBXO46Q6PJ61 603 aaPredicted RBP10.81□□□□□ -0.68
CUX1-216ENST00000558469 METTL7BQ6UX53 244 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 MIER3Q7Z3K6 550 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 OR6J1Q8NGC5 347 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 SPOCK2Q92563 424 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 AK8Q96MA6 479 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 SPATA33Q96N06 139 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 HMX1Q9NP08 348 aaPredicted RBP10.81□□□□□ -0.68
CUX1-216ENST00000558469 GNEQ9Y223 722 aaKnown RBP10.81□□□□□ -0.68
CUX1-216ENST00000558469 ARID2Q68CP9 1835 aa10.81□□□□□ -0.68
CUX1-216ENST00000558469 WDR64B1ANS9 1081 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 NOP56O00567 594 aaKnown RBP10.8□□□□□ -0.68
CUX1-216ENST00000558469 DUSP11O75319 330 aaKnown RBP10.8□□□□□ -0.68
CUX1-216ENST00000558469 MYCP01106 439 aaPredicted RBP10.8□□□□□ -0.68
CUX1-216ENST00000558469 RARBP10826 455 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 SFNP31947 248 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 MCM4P33991 863 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 UBA7P41226 1012 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 JAK3P52333 1124 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 HSDL1Q3SXM5 330 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 SHC4Q6S5L8 630 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 B3GNT9Q6UX72 402 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 USP49Q70CQ1 688 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 TLK2Q86UE8 772 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 SMAP1Q8IYB5 467 aaPredicted RBP10.8□□□□□ -0.68
CUX1-216ENST00000558469 ERMNQ8TAM6 284 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 SYMPKQ92797 1274 aaKnown RBP10.8□□□□□ -0.68
CUX1-216ENST00000558469 EMID1Q96A84 441 aaPredicted RBP10.8□□□□□ -0.68
CUX1-216ENST00000558469 EPSTI1Q96J88 318 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 GPR20Q99678 358 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 AP5M1Q9H0R1 490 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 PRDM10Q9NQV6 1147 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 DISC1Q9NRI5 854 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 LMBRD1Q9NUN5 540 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 Q9Y3F1 56 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 PCDHA10Q9Y5I2 948 aa10.8□□□□□ -0.68
CUX1-216ENST00000558469 A0A1B0GVL5 298 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 A0A1W2PQ27 194 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 A0A1W2PQ64 194 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 A0A1W2PQD8 194 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 GSTTP1A0A1W2PQM5 241 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 POTEFA5A3E0 1075 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 ATG7O95352 703 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 PSAPP07602 524 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 SUPT20HL2P0C7V6 817 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 CMA1P23946 247 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 TCF7P36402 384 aaPredicted RBP10.79□□□□□ -0.68
CUX1-216ENST00000558469 CCT6AP40227 531 aaKnown RBP10.79□□□□□ -0.68
CUX1-216ENST00000558469 EPHA7Q15375 998 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 ZRSR1Q15695 479 aaKnown RBP10.79□□□□□ -0.68
CUX1-216ENST00000558469 RESP18Q5W5W9 173 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 MIS18BP1Q6P0N0 1132 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 ABHD15Q6UXT9 468 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 CABP7Q86V35 215 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 FSIP1Q8NA03 581 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 RDM1Q8NG50 284 aa10.79□□□□□ -0.68
CUX1-216ENST00000558469 PPTC7Q8NI37 304 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms