RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 STXBP2Q15833 593 aa14.72□□□□□ -0.05
PSEN1-220ENST00000557037 USH1GQ495M9 461 aa14.72□□□□□ -0.05
PSEN1-220ENST00000557037 OSBP2Q969R2 916 aa14.72□□□□□ -0.05
PSEN1-220ENST00000557037 SPATA33Q96N06 139 aa14.72□□□□□ -0.05
PSEN1-220ENST00000557037 RNPEPQ9H4A4 650 aa14.72□□□□□ -0.05
PSEN1-220ENST00000557037 COL20A1Q9P218 1284 aa14.72□□□□□ -0.05
PSEN1-220ENST00000557037 PLXNA4Q9HCM2 1894 aa14.72□□□□□ -0.05
PSEN1-220ENST00000557037 HOXD8P13378 290 aaPredicted RBP14.71□□□□□ -0.05
PSEN1-220ENST00000557037 NPR3P17342 541 aa14.71□□□□□ -0.05
PSEN1-220ENST00000557037 GATMP50440 423 aa14.71□□□□□ -0.05
PSEN1-220ENST00000557037 HSDL1Q3SXM5 330 aa14.71□□□□□ -0.05
PSEN1-220ENST00000557037 CMTR2Q8IYT2 770 aaKnown RBP14.71□□□□□ -0.05
PSEN1-220ENST00000557037 NSUN6Q8TEA1 469 aaKnown RBP14.71□□□□□ -0.05
PSEN1-220ENST00000557037 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.05
PSEN1-220ENST00000557037 RUBCNQ92622 972 aa14.71□□□□□ -0.05
PSEN1-220ENST00000557037 CHAMP1Q96JM3 812 aa14.71□□□□□ -0.05
PSEN1-220ENST00000557037 C16orf70Q9BSU1 422 aa14.71□□□□□ -0.05
PSEN1-220ENST00000557037 SETD4Q9NVD3 440 aa14.71□□□□□ -0.05
PSEN1-220ENST00000557037 LIMD1Q9UGP4 676 aa14.71□□□□□ -0.05
PSEN1-220ENST00000557037 SUPT16HQ9Y5B9 1047 aaKnown RBP14.71□□□□□ -0.05
PSEN1-220ENST00000557037 CHRNA1P02708 482 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 SRGAP2BP0DMP2 458 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 EIF2AK2P19525 551 aaKnown RBP14.7□□□□□ -0.06
PSEN1-220ENST00000557037 HOXC8P31273 242 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 ERVFC1P60507 584 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 HSP90AB4PQ58FF6 505 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 FAM26DQ5JW98 314 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 MYSM1Q5VVJ2 828 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 ITPRIPQ8IWB1 547 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 SYTL5Q8TDW5 730 aaPredicted RBP14.7□□□□□ -0.06
PSEN1-220ENST00000557037 RMDN3Q96TC7 470 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 CDCA3Q99618 268 aaPredicted RBP14.7□□□□□ -0.06
PSEN1-220ENST00000557037 POMKQ9H5K3 350 aa14.7□□□□□ -0.06
PSEN1-220ENST00000557037 TSPY2A6NKD2 308 aa14.69□□□□□ -0.06
PSEN1-220ENST00000557037 H3BRB1 525 aa14.69□□□□□ -0.06
PSEN1-220ENST00000557037 GPAA1O43292 621 aa14.69□□□□□ -0.06
PSEN1-220ENST00000557037 IBSPP21815 317 aaPredicted RBP14.69□□□□□ -0.06
PSEN1-220ENST00000557037 ATXN1P54253 815 aaKnown RBP14.69□□□□□ -0.06
PSEN1-220ENST00000557037 LPIN1Q14693 890 aa14.69□□□□□ -0.06
PSEN1-220ENST00000557037 PPP4R3BQ5MIZ7 849 aa14.69□□□□□ -0.06
PSEN1-220ENST00000557037 IFNL3Q8IZI9 196 aa14.69□□□□□ -0.06
PSEN1-220ENST00000557037 TUT1Q9H6E5 874 aaKnown RBP14.69□□□□□ -0.06
PSEN1-220ENST00000557037 SETXQ7Z333 2677 aaKnown RBP14.68□□□□□ -0.06
PSEN1-220ENST00000557037 M0R2C6 588 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 EIF3JO75822 258 aaKnown RBP14.68□□□□□ -0.06
PSEN1-220ENST00000557037 GGPS1O95749 300 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 SLC3A2P08195 630 aaKnown RBP14.68□□□□□ -0.06
PSEN1-220ENST00000557037 WEE2P0C1S8 567 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 PPARAQ07869 468 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 APOBRQ0VD83 1088 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 CELF3Q5SZQ8 465 aaKnown RBP14.68□□□□□ -0.06
PSEN1-220ENST00000557037 ARHGEF16Q5VV41 709 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 ZKSCAN2Q63HK3 967 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 TMEM184AQ6ZMB5 413 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 LINC01599Q8WXQ3 324 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 KIF1BPQ96EK5 621 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 IWS1Q96ST2 819 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 PNMA2Q9UL42 364 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 CEP295Q9C0D2 2601 aa14.68□□□□□ -0.06
PSEN1-220ENST00000557037 WDR19Q8NEZ3 1342 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 PATL2C9JE40 543 aaKnown RBP14.67□□□□□ -0.06
PSEN1-220ENST00000557037 LGALS2P05162 132 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 ARHGAP4P98171 946 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 KCNC3Q14003 757 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 SPOUT1Q5T280 376 aaKnown RBP14.67□□□□□ -0.06
PSEN1-220ENST00000557037 KIAA0319Q5VV43 1072 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 PLPP4Q5VZY2 271 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 RGS22Q8NE09 1264 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 RTP3Q9BQQ7 232 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 EHMT1Q9H9B1 1298 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 ERVK-5Q9HDB9 667 aa14.67□□□□□ -0.06
PSEN1-220ENST00000557037 FSD2A1L4K1 749 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 DCDC2BA2VCK2 349 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
PSEN1-220ENST00000557037 STK25O00506 426 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 RANBP6O60518 1105 aaKnown RBP14.66□□□□□ -0.06
PSEN1-220ENST00000557037 NR3C2P08235 984 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 MYCLP12524 364 aaPredicted RBP14.66□□□□□ -0.06
PSEN1-220ENST00000557037 HOXB3P14651 431 aaPredicted RBP14.66□□□□□ -0.06
PSEN1-220ENST00000557037 HOXB8P17481 243 aaPredicted RBP14.66□□□□□ -0.06
PSEN1-220ENST00000557037 GNAT2P19087 354 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 SP2Q02086 613 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 RUFY4Q6ZNE9 571 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 RTN4RL1Q86UN2 441 aaPredicted RBP14.66□□□□□ -0.06
PSEN1-220ENST00000557037 SIX5Q8N196 739 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 TDRD5Q8NAT2 981 aaKnown RBP14.66□□□□□ -0.06
PSEN1-220ENST00000557037 APPBP2Q92624 585 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 COL26A1Q96A83 441 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 TMEM260Q9NX78 707 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 FBXL21Q9UKT6 434 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 PCDHB12Q9Y5F1 795 aa14.66□□□□□ -0.06
PSEN1-220ENST00000557037 FSCN2O14926 492 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 GNAT1P11488 350 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 UBE3AQ05086 875 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 CTDSPL2Q05D32 466 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 CES5AQ6NT32 575 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 NPAS4Q8IUM7 802 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 LMBR1Q8WVP7 490 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 GPKOWQ92917 476 aaPredicted RBP eCLIP14.65□□□□□ -0.06
PSEN1-220ENST00000557037 ZFP91Q96JP5 570 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms