RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 KCNQ3O43525 872 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 CCDC127Q96BQ5 260 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 SDCCAG3Q96C92 435 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 VPS39Q96JC1 886 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 FAM96AQ9H5X1 160 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 TMEM51Q9NW97 253 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 SRPRBQ9Y5M8 271 aaKnown RBP12.94□□□□□ -0.34
NEK9-210ENST00000557026 PRPSAP2O60256 369 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 MMP1P03956 469 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 GSTA1P08263 222 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 GSTA2P09210 222 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 CETPP11597 493 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 EPHB1P54762 984 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 KIF9Q9HAQ2 790 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 CBX8Q9HC52 389 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 RGS16O15492 202 aaPredicted RBP12.94□□□□□ -0.34
NEK9-210ENST00000557026 STX1BP61266 288 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 LAMB3Q13751 1172 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 THOC5Q13769 683 aaKnown RBP12.94□□□□□ -0.34
NEK9-210ENST00000557026 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 VSIG1Q86XK7 387 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 RHOT2Q8IXI1 618 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 LMNTD2Q8IXW0 634 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 PBKQ96KB5 322 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 MSTO1Q9BUK6 570 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 OLFML3Q9NRN5 406 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 TNPO2O14787 897 aaKnown RBP12.94□□□□□ -0.34
NEK9-210ENST00000557026 ASAP2O43150 1006 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 GDF11O95390 407 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 CCNE1P24864 410 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 EIF2B5Q13144 721 aaKnown RBP12.94□□□□□ -0.34
NEK9-210ENST00000557026 CEP85LQ5SZL2 805 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 TRIM72Q6ZMU5 477 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 TUBB6Q9BUF5 446 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 AAASQ9NRG9 546 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 PPP2R3BQ9Y5P8 575 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 ZHX2Q9Y6X8 837 aa12.94□□□□□ -0.34
NEK9-210ENST00000557026 KRIT1O00522 736 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 MAFGO15525 162 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 ME3Q16798 604 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 TTC23LQ6PF05 361 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 RYBPQ8N488 228 aaPredicted RBP12.93□□□□□ -0.34
NEK9-210ENST00000557026 RAB42Q8N4Z0 105 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 PI4K2BQ8TCG2 481 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 PIGSQ96S52 555 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 APOL6Q9BWW8 343 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 CALB1P05937 261 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 RHOXF2BP0C7M4 288 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 PAPOLAP51003 745 aaKnown RBP12.93□□□□□ -0.34
NEK9-210ENST00000557026 MTERF2Q49AM1 385 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 RFX6Q8HWS3 928 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 YAF2Q8IY57 180 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 SYMPKQ92797 1274 aaKnown RBP12.93□□□□□ -0.34
NEK9-210ENST00000557026 RHOXF2Q9BQY4 288 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 NLRC4Q9NPP4 1024 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 DPP7Q9UHL4 492 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 MAPK8IP1Q9UQF2 711 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 ZNF148Q9UQR1 794 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 AGLP35573 1532 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 TFAMQ00059 246 aaKnown RBP12.93□□□□□ -0.34
NEK9-210ENST00000557026 MTMR1Q13613 665 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 SNX17Q15036 470 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 MORC4Q8TE76 937 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 GPKOWQ92917 476 aaPredicted RBP eCLIP12.93□□□□□ -0.34
NEK9-210ENST00000557026 RMDN3Q96TC7 470 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 Q9H521 79 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 RNF146Q9NTX7 359 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 RNF17Q9BXT8 1623 aaKnown RBP12.93□□□□□ -0.34
NEK9-210ENST00000557026 PFASO15067 1338 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 PVALEFA0A1B0GWK0 134 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 GOLGA8HP0CJ92 632 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 USP11P51784 963 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 CBX1P83916 185 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 NUDCD1Q96RS6 583 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 RWDD2AQ9UIY3 292 aa12.93□□□□□ -0.34
NEK9-210ENST00000557026 SMIM23A6NLE4 172 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 BTBD18B2RXH4 712 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 GPC4O75487 556 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 CHEK2O96017 543 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 P4HBP07237 508 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 MAPK4P31152 587 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 TAP1Q03518 808 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 RBBP5Q15291 538 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 TAF11Q15544 211 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 GOLGA8KD6RF30 607 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 IFNB1P01574 187 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 COPB1P53618 953 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 TMEM247A6NEH6 219 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 CYP19A1P11511 503 aaPredicted RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 STX2P32856 288 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 POLR2FP61218 127 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 RAD51AP2Q09MP3 1159 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 KLC3Q6P597 504 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 ARHGEF18Q6ZSZ5 1173 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms