RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 LUC7LQ9NQ29 371 aaKnown RBP5.49□□□□□ -1.53
SRP54-212ENST00000556992 GMIPQ9P107 970 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 TNFRSF10DQ9UBN6 386 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 VTI1BQ9UEU0 232 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 AKAP12Q02952 1782 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 WDR17Q8IZU2 1322 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 OVOS2A0A0G2JMS6 1433 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 WTIPA6NIX2 430 aaPredicted RBP5.48□□□□□ -1.53
SRP54-212ENST00000556992 ABLIM1O14639 778 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 KCNQ3O43525 872 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 CLEC3AO75596 197 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 SNRPA1P09661 255 aaKnown RBP5.48□□□□□ -1.53
SRP54-212ENST00000556992 IL2RBP14784 551 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 ATP8B2P98198 1209 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 CEP85Q6P2H3 762 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 ZNF790Q6PG37 636 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 ERICH6Q7L0X2 663 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 TMEM192Q8IY95 271 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 TTC5Q8N0Z6 440 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 TMEM52Q8NDY8 209 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 TEPSINQ96N21 525 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 TMPRSS5Q9H3S3 457 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 FBXL21Q9UKT6 434 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 ITSN1Q15811 1721 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 LRP6O75581 1613 aa5.48□□□□□ -1.53
SRP54-212ENST00000556992 PIK3C2AO00443 1686 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 PXDNQ92626 1479 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 HEG1Q9ULI3 1381 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 ZC3H12DA2A288 527 aaKnown RBP5.47□□□□□ -1.53
SRP54-212ENST00000556992 CYP27B1O15528 508 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 ALDH1L1O75891 902 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 UBTFL1P0CB47 393 aaPredicted RBP5.47□□□□□ -1.53
SRP54-212ENST00000556992 INSRRP14616 1297 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 SLURP1P55000 103 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 CWF19L2Q2TBE0 894 aaKnown RBP5.47□□□□□ -1.53
SRP54-212ENST00000556992 BMP2KLQ5H9B9 411 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 KSR2Q6VAB6 950 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 GK5Q6ZS86 529 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 NPM2Q86SE8 214 aaKnown RBP5.47□□□□□ -1.53
SRP54-212ENST00000556992 FERMT3Q86UX7 667 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 DNAAF4Q8WXU2 420 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 ATG4CQ96DT6 458 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 MEIS3Q99687 375 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 USP44Q9H0E7 712 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 PHAXQ9H814 394 aaKnown RBP5.47□□□□□ -1.53
SRP54-212ENST00000556992 DDX21Q9NR30 783 aaKnown RBP eCLIP5.47□□□□□ -1.53
SRP54-212ENST00000556992 CHPF2Q9P2E5 772 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 PEAK1Q9H792 1746 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 STRCP1A6NGW2 1772 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 PCDH11XQ9BZA7 1347 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 PCDH11YQ9BZA8 1340 aa5.47□□□□□ -1.53
SRP54-212ENST00000556992 UTRNP46939 3433 aa5.46□□□□□ -1.53
SRP54-212ENST00000556992 CEP350Q5VT06 3117 aa5.46□□□□□ -1.53
SRP54-212ENST00000556992 JCADQ9P266 1359 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 PI4KAP2A4QPH2 592 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 SORBS3O60504 671 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 RAB11FIP3O75154 756 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 ZNF205O95201 554 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 PLA2G1BP04054 148 aaKnown RBP5.46□□□□□ -1.54
SRP54-212ENST00000556992 MVKQ03426 396 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 CLCQ05315 142 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 LAPTM5Q13571 262 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 PUM1Q14671 1186 aaKnown RBP eCLIP5.46□□□□□ -1.54
SRP54-212ENST00000556992 HSP90AB4PQ58FF6 505 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 BEND3Q5T5X7 828 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 NLRC3Q7RTR2 1065 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 FRMD5Q7Z6J6 570 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 PI4KAP1Q8N8J0 262 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 LINS1Q8NG48 757 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 SLC6A18Q96N87 628 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 SPATA25Q9BR10 227 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 TEX13AQ9BXU3 409 aaPredicted RBP5.46□□□□□ -1.54
SRP54-212ENST00000556992 LNPKQ9C0E8 428 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 CNNM2Q9H8M5 875 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 ACSL6Q9UKU0 697 aa5.46□□□□□ -1.54
SRP54-212ENST00000556992 NOP58Q9Y2X3 529 aaKnown RBP5.46□□□□□ -1.54
SRP54-212ENST00000556992 NALCNQ8IZF0 1738 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 KIF1AQ12756 1690 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 EXOC5O00471 708 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 VAV1P15498 845 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 IGFBP6P24592 240 aaPredicted RBP5.45□□□□□ -1.54
SRP54-212ENST00000556992 KCNC1P48547 511 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 NEXNQ0ZGT2 675 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 EFEMP1Q12805 493 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 ZXDCQ2QGD7 858 aaPredicted RBP5.45□□□□□ -1.54
SRP54-212ENST00000556992 VWA3BQ502W6 1294 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 SEZ6Q53EL9 994 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 RTP2Q5QGT7 225 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 CDCP2Q5VXM1 449 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 ZNF772Q68DY9 489 aaPredicted RBP5.45□□□□□ -1.54
SRP54-212ENST00000556992 ZC3H14Q6PJT7 736 aaKnown RBP5.45□□□□□ -1.54
SRP54-212ENST00000556992 FBXO33Q7Z6M2 555 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 ZNF496Q96IT1 587 aaPredicted RBP5.45□□□□□ -1.54
SRP54-212ENST00000556992 BTG4Q9NY30 223 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 C9orf78Q9NZ63 289 aaPredicted RBP5.45□□□□□ -1.54
SRP54-212ENST00000556992 UBP1Q9NZI7 540 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 SUSD2Q9UGT4 822 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 MAP3K2Q9Y2U5 619 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 PCDHB12Q9Y5F1 795 aa5.45□□□□□ -1.54
SRP54-212ENST00000556992 A0A1W2PQ45 241 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms