RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 FLAD1Q8NFF5 587 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 CYP2W1Q8TAV3 490 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 ESYT3A0FGR9 886 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 GOLGA6CA6NDK9 693 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 GOLGA6DP0CG33 693 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 AFAP1L1Q8TED9 768 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 GOLGA6AQ9NYA3 693 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 K7ENM7 598 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 ECE1P42892 770 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 TNNC1P63316 161 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 ZSCAN26Q16670 478 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 FAM76AQ8TAV0 307 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 SH2D4AQ9H788 454 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 GCNT4Q9P109 453 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 AFPP02771 609 aaKnown RBP16.27■□□□□ 0.2
NEK9-209ENST00000556170 CCDC93Q567U6 631 aa16.27■□□□□ 0.2
NEK9-209ENST00000556170 IRF2BP1Q8IU81 584 aa16.27■□□□□ 0.2
NEK9-209ENST00000556170 FAM186BQ8IYM0 893 aa16.27■□□□□ 0.2
NEK9-209ENST00000556170 PRMT6Q96LA8 375 aaPredicted RBP16.27■□□□□ 0.2
NEK9-209ENST00000556170 PNMA5Q96PV4 448 aa16.27■□□□□ 0.2
NEK9-209ENST00000556170 ADAM21Q9UKJ8 722 aa16.27■□□□□ 0.2
NEK9-209ENST00000556170 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.2
NEK9-209ENST00000556170 EIF3CLB5ME19 914 aaKnown RBP16.27■□□□□ 0.19
NEK9-209ENST00000556170 KLRC4O43908 158 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 BANK1Q8NDB2 785 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 ANKS1AQ92625 1134 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 DYDC2Q96IM9 177 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 EIF3CQ99613 913 aaKnown RBP16.27■□□□□ 0.19
NEK9-209ENST00000556170 TCHPQ9BT92 498 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.19
NEK9-209ENST00000556170 GOLPH3Q9H4A6 298 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 FAM204AQ9H8W3 233 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.19
NEK9-209ENST00000556170 MYH2Q9UKX2 1941 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 SHTN1A0MZ66 631 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 EIF2AK2P19525 551 aaKnown RBP16.27■□□□□ 0.19
NEK9-209ENST00000556170 PLA2G4AP47712 749 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 FAM212AQ96EL1 285 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 BLOC1S4Q9NUP1 217 aa16.27■□□□□ 0.19
NEK9-209ENST00000556170 CCDC172P0C7W6 258 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 NMT1P30419 496 aaKnown RBP16.26■□□□□ 0.19
NEK9-209ENST00000556170 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 LMBR1Q8WVP7 490 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 RIN2Q8WYP3 895 aaPredicted RBP16.26■□□□□ 0.19
NEK9-209ENST00000556170 CTTNBP2NLQ9P2B4 639 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 PALMO75781 387 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 H2AFZP0C0S5 128 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 ATP1A2P50993 1020 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 CDR1P51861 262 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 H2AFVQ71UI9 128 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 MS4A14Q96JA4 679 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 EPB41L5Q9HCM4 733 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 FBXO28Q9NVF7 368 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 RSPH10B2B2RC85 870 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 ANKRD65E5RJM6 399 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 RSPH10BP0C881 870 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 FAM102BQ5T8I3 360 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 HHIPL2Q6UWX4 724 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
NEK9-209ENST00000556170 UBLCP1Q8WVY7 318 aaPredicted RBP16.26■□□□□ 0.19
NEK9-209ENST00000556170 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
NEK9-209ENST00000556170 N4BP1O75113 896 aaKnown RBP16.25■□□□□ 0.19
NEK9-209ENST00000556170 MED24O75448 989 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 PSMC6P62333 389 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 APOBEC3HQ6NTF7 200 aaKnown RBP16.25■□□□□ 0.19
NEK9-209ENST00000556170 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 REEP2Q9BRK0 252 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 LRRC10BA6NIK2 292 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 KRT5P13647 590 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 SLC9A1P19634 815 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
NEK9-209ENST00000556170 ALKBH5Q6P6C2 394 aaKnown RBP16.25■□□□□ 0.19
NEK9-209ENST00000556170 CATSPER3Q86XQ3 398 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 IFT20Q8IY31 132 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 OPA1O60313 960 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 KIAA0754O94854 1291 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 HERVK_113P62684 666 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 XKR9Q5GH70 373 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 CCDC25Q86WR0 208 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 TEKT3Q9BXF9 490 aa16.25■□□□□ 0.19
NEK9-209ENST00000556170 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.25■□□□□ 0.19
NEK9-209ENST00000556170 SERPING1P05155 500 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 TRIM49P0CI25 452 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 TRIM49CP0CI26 452 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 MYBP10242 640 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 ZC2HC1CQ53FD0 456 aaPredicted RBP16.24■□□□□ 0.19
NEK9-209ENST00000556170 STRIP1Q5VSL9 837 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 PPM1KQ8N3J5 372 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 EIF2AK1Q9BQI3 630 aaKnown RBP16.24■□□□□ 0.19
NEK9-209ENST00000556170 AP1M1Q9BXS5 423 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 PRR12Q9ULL5 1215 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 GOLGA8IPA6NC78 632 aa16.24■□□□□ 0.19
NEK9-209ENST00000556170 GOLGA8JA6NMD2 632 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 334.9 ms