RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-233ENST00000555816 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
ATXN3-233ENST00000555816 IRS2Q9Y4H2 1338 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 KAT6BQ8WYB5 2073 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 GYS1P13807 737 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-233ENST00000555816 CTSKP43235 329 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 MAPKAPK2P49137 400 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 RAB3GAP1Q15042 981 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 CWF19L1Q69YN2 538 aaKnown RBP6.73□□□□□ -1.33
ATXN3-233ENST00000555816 DBX2Q6ZNG2 339 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 TMEFF1Q8IYR6 380 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 ZNF512BQ96KM6 892 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-233ENST00000555816 SLC9A7Q96T83 725 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 SRRTQ9BXP5 876 aaKnown RBP6.73□□□□□ -1.33
ATXN3-233ENST00000555816 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 GFOD1Q9NXC2 390 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 PCDHA5Q9Y5H7 936 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 LY75O60449 1722 aa6.73□□□□□ -1.33
ATXN3-233ENST00000555816 INSRP06213 1382 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 RPS6KA4O75676 772 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 TARBP2Q15633 366 aaKnown RBP6.72□□□□□ -1.33
ATXN3-233ENST00000555816 CYP2R1Q6VVX0 501 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 KIAA0825Q8IV33 1275 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 IGDCC3Q8IVU1 814 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 IFNL2Q8IZJ0 200 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 NUP43Q8NFH3 380 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 MRRFQ96E11 262 aaKnown RBP6.72□□□□□ -1.33
ATXN3-233ENST00000555816 TM9SF2Q99805 663 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 DSCC1Q9BVC3 393 aa6.72□□□□□ -1.33
ATXN3-233ENST00000555816 KIF24Q5T7B8 1368 aa6.71□□□□□ -1.33
ATXN3-233ENST00000555816 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 A0A1W2PQ27 194 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 A0A1W2PQ64 194 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 A0A1W2PQC6 194 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 A0A1W2PQD8 194 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 GLTPD2A6NH11 291 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 PFKLP17858 780 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 SDHBP21912 280 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 PMS1P54277 932 aaKnown RBP6.71□□□□□ -1.34
ATXN3-233ENST00000555816 CORO7P57737 925 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 ZC3H14Q6PJT7 736 aaKnown RBP6.71□□□□□ -1.34
ATXN3-233ENST00000555816 TMC6Q7Z403 805 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 TMEM52Q8NDY8 209 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 TEPSINQ96N21 525 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 SPON2Q9BUD6 331 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 ZNRF3Q9ULT6 936 aa6.71□□□□□ -1.34
ATXN3-233ENST00000555816 CICQ96RK0 1608 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-233ENST00000555816 OTOL1A6NHN0 477 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-233ENST00000555816 ERVV-2B6SEH9 535 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 PHKG2P15735 406 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 RTP2Q5QGT7 225 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 PAQR3Q6TCH7 311 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 RPTNQ6XPR3 784 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 FRMD5Q7Z6J6 570 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 CCDC144CPQ8IYA2 1237 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 NAT16Q8N8M0 369 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 PWWP2AQ96N64 755 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 TESK2Q96S53 571 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 SLC12A9Q9BXP2 914 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 ANTXR1Q9H6X2 564 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 AP5S1Q9NUS5 200 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 MINPP1Q9UNW1 487 aa6.7□□□□□ -1.34
ATXN3-233ENST00000555816 FLT4P35916 1363 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 A0A087WZG4 1122 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 ZC3H12DA2A288 527 aaKnown RBP6.69□□□□□ -1.34
ATXN3-233ENST00000555816 MEIS1O00470 390 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 SRGAP3O43295 1099 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 BUB1BO60566 1050 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-233ENST00000555816 CYBBP04839 570 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 HSP90AB1P08238 724 aaKnown RBP6.69□□□□□ -1.34
ATXN3-233ENST00000555816 CHRNA5P30532 468 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 NOL9Q5SY16 702 aaKnown RBP6.69□□□□□ -1.34
ATXN3-233ENST00000555816 JAMLQ86YT9 394 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 RBBP8NLQ8NC74 664 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-233ENST00000555816 BORCS6Q96GS4 357 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 JMJD8Q96S16 334 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 PDLIM7Q9NR12 457 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 IMPACTQ9P2X3 320 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 SF3B6Q9Y3B4 125 aaKnown RBP6.69□□□□□ -1.34
ATXN3-233ENST00000555816 KCPQ6ZWJ8 1503 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 TONSLQ96HA7 1378 aa6.69□□□□□ -1.34
ATXN3-233ENST00000555816 USP54Q70EL1 1684 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 C4BP0C0L5 1744 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 NUDT19A8MXV4 375 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-233ENST00000555816 TBC1D8O95759 1140 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 CELA3BP08861 270 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 GSTM1P09488 218 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 IGFBP6P24592 240 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-233ENST00000555816 TM4SF1P30408 202 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 MVKQ03426 396 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 DDR1Q08345 913 aa6.68□□□□□ -1.34
ATXN3-233ENST00000555816 CRTC3Q6UUV7 619 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms