RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 C16orf86Q6ZW13 317 aa7.58□□□□□ -1.2
SEC23A-209ENST00000555363 ST13P5Q8NFI4 369 aaPredicted RBP7.58□□□□□ -1.2
SEC23A-209ENST00000555363 KCTD13Q8WZ19 329 aa7.58□□□□□ -1.2
SEC23A-209ENST00000555363 ZNF669Q96BR6 464 aaPredicted RBP7.58□□□□□ -1.2
SEC23A-209ENST00000555363 ST6GALNAC2Q9UJ37 374 aa7.58□□□□□ -1.2
SEC23A-209ENST00000555363 ZNF20P17024 532 aa7.57□□□□□ -1.2
SEC23A-209ENST00000555363 GYS2P54840 703 aa7.57□□□□□ -1.2
SEC23A-209ENST00000555363 TRMT10BQ6PF06 316 aaKnown RBP7.57□□□□□ -1.2
SEC23A-209ENST00000555363 TMC5Q6UXY8 1006 aa7.57□□□□□ -1.2
SEC23A-209ENST00000555363 PHOSPHO1Q8TCT1 267 aa7.57□□□□□ -1.2
SEC23A-209ENST00000555363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
SEC23A-209ENST00000555363 KISS1RQ969F8 398 aaPredicted RBP7.57□□□□□ -1.2
SEC23A-209ENST00000555363 EPN3Q9H201 632 aa7.57□□□□□ -1.2
SEC23A-209ENST00000555363 SMOC1Q9H4F8 434 aa7.57□□□□□ -1.2
SEC23A-209ENST00000555363 PCDH12Q9NPG4 1184 aa7.57□□□□□ -1.2
SEC23A-209ENST00000555363 KDM2BQ8NHM5 1336 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 RAB11FIP3O75154 756 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 TADA3O75528 432 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 ZXDAP98168 799 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 TESK1Q15569 626 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 TAF7LQ5H9L4 462 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 EMC4Q5J8M3 183 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 MRM1Q6IN84 353 aaKnown RBP7.56□□□□□ -1.2
SEC23A-209ENST00000555363 ARHGEF18Q6ZSZ5 1173 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 SPATC1Q76KD6 591 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 TRIM48Q8IWZ4 208 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 DVL3Q92997 716 aaPredicted RBP7.56□□□□□ -1.2
SEC23A-209ENST00000555363 PFDN2Q9UHV9 154 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 ZDHHC9Q9Y397 364 aa7.56□□□□□ -1.2
SEC23A-209ENST00000555363 B4GALT3O60512 393 aa7.55□□□□□ -1.2
SEC23A-209ENST00000555363 DIAPH1O60610 1272 aaKnown RBP7.55□□□□□ -1.2
SEC23A-209ENST00000555363 EIF5BO60841 1220 aaKnown RBP7.55□□□□□ -1.2
SEC23A-209ENST00000555363 MLLT6P55198 1093 aaPredicted RBP7.55□□□□□ -1.2
SEC23A-209ENST00000555363 PPP2R2AP63151 447 aa7.55□□□□□ -1.2
SEC23A-209ENST00000555363 DENND5AQ6IQ26 1287 aa7.55□□□□□ -1.2
SEC23A-209ENST00000555363 USP53Q70EK8 1073 aa7.55□□□□□ -1.2
SEC23A-209ENST00000555363 FEZ1Q99689 392 aa7.55□□□□□ -1.2
SEC23A-209ENST00000555363 IER2Q9BTL4 223 aa7.55□□□□□ -1.2
SEC23A-209ENST00000555363 JAM3Q9BX67 310 aa7.55□□□□□ -1.2
SEC23A-209ENST00000555363 BARX1Q9HBU1 254 aaPredicted RBP7.55□□□□□ -1.2
SEC23A-209ENST00000555363 LRG1P02750 347 aa7.54□□□□□ -1.2
SEC23A-209ENST00000555363 TNFRSF1AP19438 455 aa7.54□□□□□ -1.2
SEC23A-209ENST00000555363 SSRP1Q08945 709 aaKnown RBP7.54□□□□□ -1.2
SEC23A-209ENST00000555363 MAP4K2Q12851 820 aa7.54□□□□□ -1.2
SEC23A-209ENST00000555363 SLC10A6Q3KNW5 377 aa7.54□□□□□ -1.2
SEC23A-209ENST00000555363 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
SEC23A-209ENST00000555363 VASNQ6EMK4 673 aa7.54□□□□□ -1.2
SEC23A-209ENST00000555363 CIR1Q86X95 450 aaPredicted RBP7.54□□□□□ -1.2
SEC23A-209ENST00000555363 KBTBD2Q8IY47 623 aa7.54□□□□□ -1.2
SEC23A-209ENST00000555363 SYNPOQ8N3V7 929 aa7.54□□□□□ -1.2
SEC23A-209ENST00000555363 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
SEC23A-209ENST00000555363 CCDC180Q9P1Z9 1646 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 SLC27A2O14975 620 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 MATN3O15232 486 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 GRIA2P42262 883 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 GRIN1Q05586 938 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 TCEA2Q15560 299 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 PIP4K2CQ8TBX8 421 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 POLR3GLQ9BT43 218 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 PHF20Q9BVI0 1012 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 C1QTNF3Q9BXJ4 246 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 DEF6Q9H4E7 631 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 GPR27Q9NS67 375 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 ASH2LQ9UBL3 628 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 SRRDQ9UH36 339 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 NUB1Q9Y5A7 615 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 PTCH2Q9Y6C5 1203 aa7.53□□□□□ -1.2
SEC23A-209ENST00000555363 B4GALT4O60513 344 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 FSHBP01225 129 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 PPP2CBP62714 309 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 PPP2CAP67775 309 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 HSP90AA2PQ14568 343 aaPredicted RBP7.52□□□□□ -1.21
SEC23A-209ENST00000555363 TKFCQ3LXA3 575 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 CYP4F22Q6NT55 531 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 KLHL36Q8N4N3 616 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 SH3RF3Q8TEJ3 882 aaPredicted RBP7.52□□□□□ -1.21
SEC23A-209ENST00000555363 ZCCHC14Q8WYQ9 949 aaKnown RBP7.52□□□□□ -1.21
SEC23A-209ENST00000555363 C1orf159Q96HA4 380 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 METTL14Q9HCE5 456 aaKnown RBP7.52□□□□□ -1.21
SEC23A-209ENST00000555363 SLC6A20Q9NP91 592 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 PPP4R1LQ9P1A2 415 aa7.52□□□□□ -1.21
SEC23A-209ENST00000555363 A0A1W2PQU0 124 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 C1QTNF3-AMACRE9PGA6 284 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 FBXO21O94952 628 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 MASP1P48740 699 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 NFATC3Q12968 1075 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 LONRF2Q1L5Z9 754 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 ZSWIM2Q8NEG5 633 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 IGDCC4Q8TDY8 1250 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 CDK5RAP1Q96SZ6 601 aaKnown RBP7.51□□□□□ -1.21
SEC23A-209ENST00000555363 SPATA9Q9BWV2 254 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 RBPJLQ9UBG7 517 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 NPFFR2Q9Y5X5 522 aa7.51□□□□□ -1.21
SEC23A-209ENST00000555363 MARCH6O60337 910 aa7.5□□□□□ -1.21
SEC23A-209ENST00000555363 ASMTLO95671 621 aa7.5□□□□□ -1.21
SEC23A-209ENST00000555363 GNAT1P11488 350 aa7.5□□□□□ -1.21
SEC23A-209ENST00000555363 AMPD3Q01432 767 aa7.5□□□□□ -1.21
SEC23A-209ENST00000555363 SPIRE1Q08AE8 756 aa7.5□□□□□ -1.21
SEC23A-209ENST00000555363 SSBP3Q9BWW4 388 aaPredicted RBP7.5□□□□□ -1.21
SEC23A-209ENST00000555363 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms