RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FIZ1Q96SL8 496 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 RNF146Q9NTX7 359 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 CYP39A1Q9NYL5 469 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 GJA5P36382 358 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 NOLC1Q14978 699 aaKnown RBP eCLIP9.93□□□□□ -0.82
TDP1-210ENST00000554976 MIIPQ5JXC2 388 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 LDLRAD1Q5T700 205 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 SNRNP48Q6IEG0 339 aaKnown RBP9.93□□□□□ -0.82
TDP1-210ENST00000554976 KRT26Q7Z3Y9 468 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 CLMNQ96JQ2 1002 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 ZNF577Q9BSK1 485 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 RUSC1Q9BVN2 902 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 RGL1Q9NZL6 768 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 BTBD7Q9P203 1132 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 RASSF10A6NK89 507 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 EEF1GP26641 437 aaKnown RBP9.92□□□□□ -0.82
TDP1-210ENST00000554976 COPB1P53618 953 aaKnown RBP9.92□□□□□ -0.82
TDP1-210ENST00000554976 EPHA7Q15375 998 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 BMT2Q1RMZ1 405 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 CEP135Q66GS9 1140 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 GPAT2Q6NUI2 795 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 XRRA1Q6P2D8 792 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 RNF207Q6ZRF8 634 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 C1orf186Q6ZWK4 172 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 SULF1Q8IWU6 871 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 DRC7Q8IY82 874 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 ERMNQ8TAM6 284 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 NOC3LQ8WTT2 800 aaKnown RBP9.92□□□□□ -0.82
TDP1-210ENST00000554976 DYDC2Q96IM9 177 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 ZFP91Q96JP5 570 aaPredicted RBP9.92□□□□□ -0.82
TDP1-210ENST00000554976 SENP7Q9BQF6 1050 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 SLC39A2Q9NP94 309 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 ZSWIM8A7E2V4 1837 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 IPO5O00410 1097 aaKnown RBP9.92□□□□□ -0.82
TDP1-210ENST00000554976 PPIL2Q13356 520 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 SPECC1LQ69YQ0 1117 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 MOB2Q70IA6 237 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 VSIG10LQ86VR7 867 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 GPBP1Q86WP2 473 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 CTAGE1Q96RT6 745 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 REEP2Q9BRK0 252 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 A1CFQ9NQ94 594 aaKnown RBP9.92□□□□□ -0.82
TDP1-210ENST00000554976 PANK4Q9NVE7 773 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 TMOD4Q9NZQ9 345 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 ZMYM2Q9UBW7 1377 aa9.92□□□□□ -0.82
TDP1-210ENST00000554976 PSMA7O14818 248 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 LYPLA2O95372 231 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 ZNF76P36508 570 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 ZNF131P52739 623 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 PRKG1Q13976 671 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 BAATQ14032 418 aaPredicted RBP9.91□□□□□ -0.82
TDP1-210ENST00000554976 SCFD1Q8WVM8 642 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 INPP4AQ96PE3 977 aaPredicted RBP9.91□□□□□ -0.82
TDP1-210ENST00000554976 STRA6Q9BX79 667 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 TEKT3Q9BXF9 490 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 TEX13BQ9BXU2 312 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 BCAS3Q9H6U6 928 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 IREB2P48200 963 aaKnown RBP9.91□□□□□ -0.82
TDP1-210ENST00000554976 TERF1P54274 439 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 DHX8Q14562 1220 aaKnown RBP9.91□□□□□ -0.82
TDP1-210ENST00000554976 RINT1Q6NUQ1 792 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 FILIP1Q7Z7B0 1213 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 ERO1BQ86YB8 467 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 RIOX2Q8IUF8 465 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 ANKRD13AQ8IZ07 590 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 NEK9Q8TD19 979 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 HOMER2Q9NSB8 354 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 HOXC10Q9NYD6 342 aa9.91□□□□□ -0.82
TDP1-210ENST00000554976 BICDL2A1A5D9 508 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 USP27XA6NNY8 438 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 CXCL11O14625 94 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 ZBTB39O15060 712 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 GAS7O60861 476 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 ATP9AO75110 1047 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 STBD1O95210 358 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 CCNE2O96020 404 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 GYPCP04921 128 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 CASP5P51878 434 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 MARSP56192 900 aaKnown RBP9.9□□□□□ -0.82
TDP1-210ENST00000554976 LRRC63Q05C16 580 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 SPAG1Q07617 926 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 MAPK7Q13164 816 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 CTTNQ14247 550 aaKnown RBP9.9□□□□□ -0.82
TDP1-210ENST00000554976 E4F1Q66K89 784 aaPredicted RBP9.9□□□□□ -0.82
TDP1-210ENST00000554976 ELP3Q9H9T3 547 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 LGALS16A8MUM7 142 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 RNF225M0QZC1 329 aaPredicted RBP9.9□□□□□ -0.82
TDP1-210ENST00000554976 KCNA2P16389 499 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 EDNRBP24530 442 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 GOLGA8FQ08AF8 430 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 GOLGA8DPQ0D2H9 430 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 DPY19L2Q6NUT2 758 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 GPRASP2Q96D09 838 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 FGD4Q96M96 766 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 SRRTQ9BXP5 876 aaKnown RBP9.9□□□□□ -0.82
TDP1-210ENST00000554976 R3HDMLQ9H3Y0 253 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 ACAD9Q9H845 621 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 DNM3Q9UQ16 869 aa9.9□□□□□ -0.82
TDP1-210ENST00000554976 A0A1W2PQC6 194 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms