RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DHX37Q8IY37 1157 aaKnown RBP16.28■□□□□ 0.2
SHMT2-210ENST00000553950 ATP6V0A1Q93050 837 aa16.28■□□□□ 0.2
SHMT2-210ENST00000553950 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-210ENST00000553950 DISC1Q9NRI5 854 aa16.28■□□□□ 0.2
SHMT2-210ENST00000553950 FLRT1Q9NZU1 646 aa16.28■□□□□ 0.2
SHMT2-210ENST00000553950 STK17AQ9UEE5 414 aa16.28■□□□□ 0.2
SHMT2-210ENST00000553950 Q9Y3F1 56 aa16.28■□□□□ 0.2
SHMT2-210ENST00000553950 SAMM50Q9Y512 469 aa16.28■□□□□ 0.2
SHMT2-210ENST00000553950 DDX39AO00148 427 aaKnown RBP16.27■□□□□ 0.2
SHMT2-210ENST00000553950 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-210ENST00000553950 CYBAP13498 195 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 CYP2C19P33261 490 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 CCT6AP40227 531 aaKnown RBP16.27■□□□□ 0.2
SHMT2-210ENST00000553950 STAT6P42226 847 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 CTCFP49711 727 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-210ENST00000553950 TNFAIP2Q03169 654 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 CCDC144BQ3MJ40 725 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-210ENST00000553950 HYIQ5T013 277 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 KANK3Q6NY19 840 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 CEP57L1Q8IYX8 460 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 IQUBQ8NA54 791 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 TIGD1Q96MW7 591 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 TSKSQ9UJT2 592 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 PCDHA10Q9Y5I2 948 aa16.27■□□□□ 0.2
SHMT2-210ENST00000553950 A0A1B0GVL5 298 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 MSCO60682 206 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 ATP9AO75110 1047 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 P4HBP07237 508 aaKnown RBP16.26■□□□□ 0.19
SHMT2-210ENST00000553950 ZNF865P0CJ78 1059 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-210ENST00000553950 ADCYAP1R1P41586 468 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 NDUFA8P51970 172 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 ACTR2P61160 394 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 FAM160B1Q5W0V3 765 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 CYFIP1Q7L576 1253 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 PPTC7Q8NI37 304 aa16.26■□□□□ 0.19
SHMT2-210ENST00000553950 EIF2AK1Q9BQI3 630 aaKnown RBP16.26■□□□□ 0.19
SHMT2-210ENST00000553950 EMSYQ7Z589 1322 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 SEPT4O43236 478 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 ARIH2O95376 493 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 SUPT20HL2P0C7V6 817 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 HSPA8P11142 646 aaKnown RBP16.25■□□□□ 0.19
SHMT2-210ENST00000553950 GRK4P32298 578 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 SLC26A2P50443 739 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 LY6KQ17RY6 165 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 SPECC1Q5M775 1068 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 FMR1NBQ8N0W7 255 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-210ENST00000553950 OR6J1Q8NGC5 347 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 SEPT1Q8WYJ6 367 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 GJA10Q969M2 543 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 EPSTI1Q96J88 318 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 SPATA33Q96N06 139 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 LRRC27Q9C0I9 530 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 GOLPH3LQ9H4A5 285 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 ZSWIM4Q9H7M6 989 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
SHMT2-210ENST00000553950 IGSF9BQ9UPX0 1349 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 PP2D1A8MPX8 630 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 CTAGE5O15320 804 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 POLR2DO15514 142 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 MYL1P05976 194 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 HSPA1AP0DMV8 641 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 HSPA1BP0DMV9 641 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 PRKAR2AP13861 404 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 QARSP47897 775 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 CPT1AP50416 773 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 PSMC5P62195 406 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 ARHGAP1Q07960 439 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 KARSQ15046 597 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 PKN2Q16513 984 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 TMEM119Q4V9L6 283 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 CTU1Q7Z7A3 348 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 TLK2Q86UE8 772 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 ELOA2Q8IYF1 753 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 FAM167AQ96KS9 214 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 CCDC43Q96MW1 224 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 LXNQ9BS40 222 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 MMTAG2Q9BU76 263 aaKnown RBP16.24■□□□□ 0.19
SHMT2-210ENST00000553950 AP5M1Q9H0R1 490 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 AZI2Q9H6S1 392 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 PDGFCQ9NRA1 345 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 DACT1Q9NYF0 836 aa16.24■□□□□ 0.19
SHMT2-210ENST00000553950 EML1O00423 815 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 BACH1O14867 736 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 TRAK2O60296 914 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 DUSP11O75319 330 aaKnown RBP16.23■□□□□ 0.19
SHMT2-210ENST00000553950 ZNF202O95125 648 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 ATG7O95352 703 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 LYPLA2O95372 231 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 CCNE2O96020 404 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 SLFN14P0C7P3 912 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 RARBP10826 455 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 ELNP15502 786 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 LIG1P18858 919 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 PLCG1P19174 1290 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 AMPD3Q01432 767 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 SP2Q02086 613 aa16.23■□□□□ 0.19
SHMT2-210ENST00000553950 SP4Q02446 784 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms