RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 REEP2Q9BRK0 252 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 EHMT1Q9H9B1 1298 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 TMOD4Q9NZQ9 345 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 DNM3Q9UQ16 869 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 SFI1A8K8P3 1242 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 MAP3K9P80192 1104 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 ITGB3BPQ13352 177 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 COG2Q14746 738 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 PGM5Q15124 567 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 HERC4Q5GLZ8 1057 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 MCF2L2Q86YR7 1114 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 RMDN3Q96TC7 470 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 HSD17B14Q9BPX1 270 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 SPDYE16A6NNV3 312 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 C19orf81C9J6K1 198 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 PPP2R5CQ13362 524 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 GIT2Q14161 759 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 TKFCQ3LXA3 575 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 EAPPQ56P03 285 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 FAM26FQ5R3K3 315 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 CNOT6LQ96LI5 555 aaKnown RBP14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 PCDHA2Q9Y5H9 948 aa14.18□□□□□ -0.14
VIPAS39-206ENST00000553888 WDR81Q562E7 1941 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 B4DLN1 442 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 UBXN1Q04323 297 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 FILIP1LQ4L180 1135 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 CENPPQ6IPU0 288 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 CTAGE1Q96RT6 745 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 SH2D3AQ9BRG2 576 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 PXMP2Q9NR77 195 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 LRRC10BA6NIK2 292 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 IRF6O14896 467 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 SORBS3O60504 671 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 ATP9AO75110 1047 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 KLK7P49862 253 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 FXR1P51114 621 aaKnown RBP eCLIP14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 ILDR2Q71H61 639 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 CDCA5Q96FF9 252 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 POLR3CQ9BUI4 534 aaPredicted RBP14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 R3HDMLQ9H3Y0 253 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 THAP9Q9H5L6 903 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 RABGAP1Q9Y3P9 1069 aa14.17□□□□□ -0.14
VIPAS39-206ENST00000553888 GYPCP04921 128 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 CASP14P31944 242 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 EPHX2P34913 555 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 TTLL12Q14166 644 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 SFR1Q86XK3 245 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 CCAR2Q8N163 923 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 PDCD2LQ9BRP1 358 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 TEKT3Q9BXF9 490 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 TMX1Q9H3N1 280 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 BMP2KQ9NSY1 1161 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 ADAMTS5Q9UNA0 930 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 TELO2Q9Y4R8 837 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 TESPA1A2RU30 521 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 DHX15O43143 795 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 SETQ01105 290 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 GHRHRQ02643 423 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 MTF1Q14872 753 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 GPR162Q16538 588 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 ARHGEF16Q5VV41 709 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 PCNX4Q63HM2 1172 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 GADL1Q6ZQY3 521 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 GUF1Q8N442 669 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 LRRC27Q9C0I9 530 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 IKZF4Q9H2S9 585 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 UBIAD1Q9Y5Z9 338 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 CSADQ9Y600 493 aa14.16□□□□□ -0.14
VIPAS39-206ENST00000553888 BICDL2A1A5D9 508 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 TMEM150BA6NC51 233 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 MTMR1Q13613 665 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 B3GNT9Q6UX72 402 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 CCDC65Q8IXS2 484 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 MYOCDQ8IZQ8 938 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 SCFD1Q8WVM8 642 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 LXNQ9BS40 222 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 TUBGCP2Q9BSJ2 902 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 AGO4Q9HCK5 861 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 SPAG1Q07617 926 aa14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 MAGEC2Q9UBF1 373 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-206ENST00000553888 EYA4O95677 639 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 MYBP10242 640 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 MTIF2P46199 727 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 FSTL1Q12841 308 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 COBLL1Q53SF7 1204 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 RINT1Q6NUQ1 792 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 DPY19L2Q6NUT2 758 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 ANKRD20A12PQ8NF67 263 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 A1CFQ9NQ94 594 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 JADE2Q9NQC1 790 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 EEF1GP26641 437 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 SEMA3FQ13275 785 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 MIIPQ5JXC2 388 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 ZNF507Q8TCN5 953 aa14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 BAG1Q99933 345 aaPredicted RBP14.14□□□□□ -0.15
VIPAS39-206ENST00000553888 BTBD7Q9P203 1132 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms