RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 OXSR1O95747 527 aaPredicted RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 DSTYKQ6XUX3 929 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 RGS9BPQ6ZS82 235 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 CCNJLQ8IV13 435 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 SLC7A3Q8WY07 619 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 WIZO95785 1651 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 IARSP41252 1262 aaKnown RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 TPD52P55327 224 aaPredicted RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 PPP1R42Q7Z4L9 355 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 HELBQ8NG08 1087 aaPredicted RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 MDM1Q8TC05 714 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 RMDN1Q96DB5 314 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 ACAP3Q96P50 834 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 CYLDQ9NQC7 956 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 WDR70Q9NW82 654 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 HBS1LQ9Y450 684 aaKnown RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 HEY1Q9Y5J3 304 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 SBNO2Q9Y2G9 1366 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 LRRC9Q6ZRR7 1453 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 GSTT2P0CG29 244 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 GSTT2BP0CG30 244 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 CCNCP24863 283 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 VHLP40337 213 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 CYP4V2Q6ZWL3 525 aaPredicted RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 BLZF1Q9H2G9 400 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 SAP30BPQ9UHR5 308 aaKnown RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 SPO11Q9Y5K1 396 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 CUX2O14529 1486 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 ZNF185O15231 689 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 POLR2DO15514 142 aaKnown RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 STX10O60499 249 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 ESRRGP62508 458 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 PPP2R2AP63151 447 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 EIF2B5Q13144 721 aaKnown RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 DENND2CQ68D51 928 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 TTLL7Q6ZT98 887 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 MAP3K19Q56UN5 1328 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 DAB1O75553 588 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 PLCG2P16885 1265 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 KCNJ2P63252 427 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 SMYD4Q8IYR2 804 aaPredicted RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 DQX1Q8TE96 717 aaKnown RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 HSPBAP1Q96EW2 488 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 ZIM3Q96PE6 472 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 ATP13A3Q9H7F0 1226 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 VIPAS39Q9H9C1 493 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 SMARCAL1Q9NZC9 954 aa9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 GPC6Q9Y625 555 aaPredicted RBP9.7□□□□□ -0.86
GTF2A1-203ENST00000553612 AGRPO00253 132 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ADCY6O43306 1168 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 KLHL41O60662 606 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 FYNP06241 537 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 PDIA5Q14554 519 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 RRS1Q15050 365 aaKnown RBP9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 CARTPTQ16568 116 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ANKRD36BP1Q96IX9 119 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 PRMT1Q99873 361 aaKnown RBP9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 SLC35C2Q9NQQ7 365 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 EHD2Q9NZN4 543 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 PLEKHH2Q8IVE3 1493 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 MFN2O95140 757 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ARHGAP4P98171 946 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 SNAP47Q5SQN1 464 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 VPS39Q96JC1 886 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 DCUN1D5Q9BTE7 237 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 MTMR12Q9C0I1 747 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 FAM53CQ9NYF3 392 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 GNAQP50148 359 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ANO4Q32M45 955 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 CABP7Q86V35 215 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 GOLM1Q8NBJ4 401 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 HNRNPLLQ8WVV9 542 aaKnown RBP9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 UQCC2Q9BRT2 126 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 GGA2Q9UJY4 613 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 KLF18A0A0U1RQI7 1052 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 GOLGA8RI6L899 631 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 LIN7AO14910 233 aaPredicted RBP9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ZNF18P17022 549 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 MCM7P33993 719 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 HSPA1LP34931 641 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 NFE2L2Q16236 605 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ZC3H15Q8WU90 426 aaKnown RBP9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 E7ENQ6 273 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 BAIAP3O94812 1187 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ADCY8P40145 1251 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 CSE1LP55060 971 aaKnown RBP9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 ADALQ6DHV7 355 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 TAB3Q8N5C8 712 aaPredicted RBP9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 TMEM206Q9H813 350 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 C10orf88Q9H8K7 445 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 MARCH7Q9H992 704 aa9.69□□□□□ -0.86
GTF2A1-203ENST00000553612 CPA3P15088 417 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 MED21Q13503 144 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 GRAMD1CQ8IYS0 662 aa9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 ST13P5Q8NFI4 369 aaPredicted RBP9.68□□□□□ -0.86
GTF2A1-203ENST00000553612 RAPGEF5Q92565 580 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms