RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 IFNL3Q8IZI9 196 aa13.85□□□□□ -0.19
SNRPF-205ENST00000553192 DTWD2Q8NBA8 298 aa13.85□□□□□ -0.19
SNRPF-205ENST00000553192 LINC01599Q8WXQ3 324 aa13.85□□□□□ -0.19
SNRPF-205ENST00000553192 GPCPD1Q9NPB8 672 aa13.85□□□□□ -0.19
SNRPF-205ENST00000553192 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
SNRPF-205ENST00000553192 MYO10Q9HD67 2058 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 GPAA1O43292 621 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 TECP42680 631 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 ERVFC1P60507 584 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 ADAM17P78536 824 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 RTN4RL1Q86UN2 441 aaPredicted RBP13.84□□□□□ -0.19
SNRPF-205ENST00000553192 NSUN6Q8TEA1 469 aaKnown RBP13.84□□□□□ -0.19
SNRPF-205ENST00000553192 KIF1BPQ96EK5 621 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 CDCA3Q99618 268 aaPredicted RBP13.84□□□□□ -0.19
SNRPF-205ENST00000553192 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 POMKQ9H5K3 350 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 NR2E1Q9Y466 385 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
SNRPF-205ENST00000553192 MRVI1Q9Y6F6 885 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 TTC3P53804 2025 aa13.84□□□□□ -0.19
SNRPF-205ENST00000553192 PATL2C9JE40 543 aaKnown RBP13.83□□□□□ -0.2
SNRPF-205ENST00000553192 H3BRB1 525 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 FSCN2O14926 492 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 EIF3JO75822 258 aaKnown RBP13.83□□□□□ -0.2
SNRPF-205ENST00000553192 MGAT3Q09327 533 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 LPIN1Q14693 890 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 PAN2Q504Q3 1202 aaKnown RBP13.83□□□□□ -0.2
SNRPF-205ENST00000553192 HSP90AB4PQ58FF6 505 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 CELF3Q5SZQ8 465 aaKnown RBP13.83□□□□□ -0.2
SNRPF-205ENST00000553192 MICAL1Q8TDZ2 1067 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 RUBCNQ92622 972 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 APPBP2Q92624 585 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 SPATA33Q96N06 139 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 IWS1Q96ST2 819 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 TUT1Q9H6E5 874 aaKnown RBP13.83□□□□□ -0.2
SNRPF-205ENST00000553192 SETD4Q9NVD3 440 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 KIAA1671Q9BY89 1806 aa13.83□□□□□ -0.2
SNRPF-205ENST00000553192 TSPY2A6NKD2 308 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 M0R2C6 588 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 APPP05067 770 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 RLBP1P12271 317 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 GATMP50440 423 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 ATXN1P54253 815 aaKnown RBP13.82□□□□□ -0.2
SNRPF-205ENST00000553192 SP2Q02086 613 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 PPARAQ07869 468 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 USH1GQ495M9 461 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 PPP4R3BQ5MIZ7 849 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 ZKSCAN2Q63HK3 967 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 RMDN3Q96TC7 470 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 BCAS3Q9H6U6 928 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 PNMA2Q9UL42 364 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 MYH7P12883 1935 aa13.82□□□□□ -0.2
SNRPF-205ENST00000553192 PLXNA4Q9HCM2 1894 aa13.81□□□□□ -0.2
SNRPF-205ENST00000553192 GGPS1O95749 300 aa13.81□□□□□ -0.2
SNRPF-205ENST00000553192 LGALS2P05162 132 aa13.81□□□□□ -0.2
SNRPF-205ENST00000553192 NR3C2P08235 984 aa13.81□□□□□ -0.2
SNRPF-205ENST00000553192 GNAT2P19087 354 aa13.81□□□□□ -0.2
SNRPF-205ENST00000553192 EIF2AK2P19525 551 aaKnown RBP13.81□□□□□ -0.2
SNRPF-205ENST00000553192 RASGRP4Q8TDF6 673 aa13.81□□□□□ -0.2
SNRPF-205ENST00000553192 HINFPQ9BQA5 517 aa13.81□□□□□ -0.2
SNRPF-205ENST00000553192 AGO3Q9H9G7 860 aaKnown RBP13.81□□□□□ -0.2
SNRPF-205ENST00000553192 LIMD1Q9UGP4 676 aa13.81□□□□□ -0.2
SNRPF-205ENST00000553192 KIAA1217Q5T5P2 1943 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 FSD2A1L4K1 749 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 PDHBP11177 359 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
SNRPF-205ENST00000553192 HOXB8P17481 243 aaPredicted RBP13.8□□□□□ -0.2
SNRPF-205ENST00000553192 UBE3AQ05086 875 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 LLGL2Q6P1M3 1020 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 ITPRIPQ8IWB1 547 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 ZDHHC14Q8IZN3 488 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 GPKOWQ92917 476 aaPredicted RBP eCLIP13.8□□□□□ -0.2
SNRPF-205ENST00000553192 TMEM47Q9BQJ4 181 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 RTP3Q9BQQ7 232 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
SNRPF-205ENST00000553192 UBA1P22314 1058 aaKnown RBP13.79□□□□□ -0.2
SNRPF-205ENST00000553192 FBXO47Q5MNV8 452 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 ARHGEF16Q5VV41 709 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 RUFY4Q6ZNE9 571 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 SUMF1Q8NBK3 374 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 LMBR1Q8WVP7 490 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 RIN2Q8WYP3 895 aaPredicted RBP13.79□□□□□ -0.2
SNRPF-205ENST00000553192 MAF1Q9H063 256 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 ADAM7Q9H2U9 754 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 CPVLQ9H3G5 476 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 PXMP2Q9NR77 195 aa13.79□□□□□ -0.2
SNRPF-205ENST00000553192 HIDE1A8MVS5 230 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 FOXP2O15409 715 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
SNRPF-205ENST00000553192 FGF18O76093 207 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
SNRPF-205ENST00000553192 ADRB1P08588 477 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 SRGAP2BP0DMP2 458 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 CTDSPL2Q05D32 466 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 ZNF543Q08ER8 600 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
SNRPF-205ENST00000553192 KIAA0319Q5VV43 1072 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms