RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 LDHDQ86WU2 507 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 SELENOOQ9BVL4 669 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 TRIM9Q9C026 710 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 WDR44Q5JSH3 913 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 THNSL1Q8IYQ7 743 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 KCNB2Q92953 911 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 PARD6BQ9BYG5 372 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 IKZF4Q9H2S9 585 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 RNF181Q9P0P0 153 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 RIC1Q4ADV7 1423 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 CSDE1O75534 798 aaKnown RBP11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 RNF207Q6ZRF8 634 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 SLFN12Q8IYM2 578 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 FAM49AQ9H0Q0 323 aaPredicted RBP11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 LARSQ9P2J5 1176 aaKnown RBP11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 PRR12Q9ULL5 1215 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 IFT172Q9UG01 1749 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 INPP5BP32019 993 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 CLCN6P51797 869 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 VAV2P52735 878 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 HAUS1Q96CS2 278 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 TCHHQ07283 1943 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 MYBP10242 640 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 SWSAP1Q6NVH7 229 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 NFRKBQ6P4R8 1299 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 CWC15Q9P013 229 aaKnown RBP11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 KIF11P52732 1056 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 GPRC5CQ9NQ84 441 aa11.81□□□□□ -0.52
TGFBR1-209ENST00000552516 GPR75-ASB3A0A0A6YYF3 556 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 ATF7P17544 494 aaPredicted RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 PSMC6P62333 389 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 TFAMQ00059 246 aaKnown RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 MTMR1Q13613 665 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 HP1BP3Q5SSJ5 553 aaPredicted RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 CFAP58Q5T655 872 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 RCSD1Q6JBY9 416 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 C16orf86Q6ZW13 317 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 MS4A14Q96JA4 679 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 FUCA2Q9BTY2 467 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 TRIM6Q9C030 488 aaPredicted RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 STK36Q9NRP7 1315 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 GOLGA8SH3BPF8 625 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 GBP6Q6ZN66 633 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 ALDH8A1Q9H2A2 487 aaPredicted RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 IPO5O00410 1097 aaKnown RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 LONRF2Q1L5Z9 754 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 SYCP2LQ5T4T6 812 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 ASIC3Q9UHC3 531 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 KDM3AQ9Y4C1 1321 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 F5H423 210 aaPredicted RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 CASP4P49662 377 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 DYNLT1P63172 113 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 SCYL2Q6P3W7 929 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 DCUN1D2Q6PH85 259 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 CCDC105Q8IYK2 499 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 RPAP3Q9H6T3 665 aaPredicted RBP11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 RNF19AQ9NV58 838 aa11.8□□□□□ -0.52
TGFBR1-209ENST00000552516 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 DPYDQ12882 1025 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 VWA3BQ502W6 1294 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 ZNF653Q96CK0 615 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 RNF146Q9NTX7 359 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 ZNF70Q9UC06 446 aaPredicted RBP11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 KCNH2Q12809 1159 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 SLC27A3Q5K4L6 730 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 RAD54LQ92698 747 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 FAM118BQ9BPY3 351 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 LXNQ9BS40 222 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 KMT5AQ9NQR1 393 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 NEURL4Q96JN8 1562 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 GOLGA6L10A0A0M3HER8 536 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 SLCO1A2P46721 670 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 TMEM62Q0P6H9 643 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 BAATQ14032 418 aaPredicted RBP11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 ELP3Q9H9T3 547 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 KRIT1O00522 736 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 ASNSP08243 561 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 GMPSP49915 693 aaPredicted RBP11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 SLC15A2Q16348 729 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 ZNF384Q8TF68 577 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 PARVGQ9HBI0 331 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 CETN2P41208 172 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 TRAF1Q13077 416 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 MAN2A1Q16706 1144 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 PRPF38AQ8NAV1 312 aaKnown RBP11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 OGFRQ9NZT2 677 aa11.79□□□□□ -0.52
TGFBR1-209ENST00000552516 BMP6P22004 513 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 DMP1Q13316 513 aaPredicted RBP11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 GALNT17Q6IS24 598 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 PLCB1Q9NQ66 1216 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 GGA3Q9NZ52 723 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 GABBR1Q9UBS5 961 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 NRXN3Q9Y4C0 1643 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms