RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 ZNF543Q08ER8 600 aa25.96■■□□□ 1.75
NPAS3-211ENST00000551634 USP38Q8NB14 1042 aa25.96■■□□□ 1.75
NPAS3-211ENST00000551634 IFT81Q8WYA0 676 aa25.96■■□□□ 1.75
NPAS3-211ENST00000551634 ARHGEF1Q92888 912 aaKnown RBP25.96■■□□□ 1.75
NPAS3-211ENST00000551634 KRT12Q99456 494 aa25.96■■□□□ 1.75
NPAS3-211ENST00000551634 TMEM59LQ9UK28 342 aa25.96■■□□□ 1.75
NPAS3-211ENST00000551634 ZNF233A6NK53 670 aa25.95■■□□□ 1.75
NPAS3-211ENST00000551634 FAM153BP0C7A2 387 aa25.95■■□□□ 1.75
NPAS3-211ENST00000551634 GABPAQ06546 454 aa25.95■■□□□ 1.75
NPAS3-211ENST00000551634 FAM153CQ494X1 144 aa25.95■■□□□ 1.75
NPAS3-211ENST00000551634 TBC1D22AQ8WUA7 517 aa25.95■■□□□ 1.75
NPAS3-211ENST00000551634 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.95■■□□□ 1.75
NPAS3-211ENST00000551634 FAM153AQ9UHL3 310 aa25.95■■□□□ 1.75
NPAS3-211ENST00000551634 C10orf71Q711Q0 1435 aa25.95■■□□□ 1.74
NPAS3-211ENST00000551634 UBE2SQ16763 222 aa25.95■■□□□ 1.74
NPAS3-211ENST00000551634 TAF4BQ92750 862 aa25.95■■□□□ 1.74
NPAS3-211ENST00000551634 NGLY1Q96IV0 654 aa25.95■■□□□ 1.74
NPAS3-211ENST00000551634 GPR101Q96P66 508 aaPredicted RBP25.95■■□□□ 1.74
NPAS3-211ENST00000551634 GPCPD1Q9NPB8 672 aa25.95■■□□□ 1.74
NPAS3-211ENST00000551634 EMILIN3Q9NT22 766 aa25.95■■□□□ 1.74
NPAS3-211ENST00000551634 ADAMTS1Q9UHI8 967 aa25.95■■□□□ 1.74
NPAS3-211ENST00000551634 BZW2Q9Y6E2 419 aaKnown RBP25.95■■□□□ 1.74
NPAS3-211ENST00000551634 KRT14P02533 472 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 PLA2G4BP0C869 781 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 MYBP10242 640 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 ADGRF4Q8IZF3 695 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 LRRC47Q8N1G4 583 aaKnown RBP25.94■■□□□ 1.74
NPAS3-211ENST00000551634 SCFD1Q8WVM8 642 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 CASKIN2Q8WXE0 1202 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 PITPNM2Q9BZ72 1349 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 CETN3O15182 167 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 SSBP05455 408 aaKnown RBP eCLIP25.94■■□□□ 1.74
NPAS3-211ENST00000551634 EPS15P42566 896 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 GPSM2P81274 684 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 ADAM9Q13443 819 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 IFI16Q16666 785 aaKnown RBP25.94■■□□□ 1.74
NPAS3-211ENST00000551634 HERC4Q5GLZ8 1057 aaPredicted RBP25.94■■□□□ 1.74
NPAS3-211ENST00000551634 ICE2Q659A1 982 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 SLC51AQ86UW1 340 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 FAM133AQ8N9E0 248 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 PIK3R5Q8WYR1 880 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 PLCB1Q9NQ66 1216 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 FOCADQ5VW36 1801 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 FRMD3A2A2Y4 597 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 NELFCDQ8IXH7 590 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 MICALL1Q8N3F8 863 aa25.94■■□□□ 1.74
NPAS3-211ENST00000551634 ERLIN2O94905 339 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 TTLL1O95922 423 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 PDCLQ13371 301 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 MFSD14BQ5SR56 506 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 PBKQ96KB5 322 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 FGFBP2Q9BYJ0 223 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 GLT8D2Q9H1C3 349 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 KIAA1024Q9UPX6 916 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 MYH7BA7E2Y1 1941 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 ESYT3A0FGR9 886 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 ZSCAN5CA6NGD5 496 aaPredicted RBP25.93■■□□□ 1.74
NPAS3-211ENST00000551634 E9PMD0 336 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 NDUFAB1O14561 156 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 UFL1O94874 794 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 KCNH2Q12809 1159 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 GPBP1Q86WP2 473 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 TBC1D7Q9P0N9 293 aa25.93■■□□□ 1.74
NPAS3-211ENST00000551634 ATP8B3O60423 1300 aa25.92■■□□□ 1.74
NPAS3-211ENST00000551634 PPP1R11O60927 126 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-211ENST00000551634 CYP11B2P19099 503 aa25.92■■□□□ 1.74
NPAS3-211ENST00000551634 HSPA9P38646 679 aaKnown RBP25.92■■□□□ 1.74
NPAS3-211ENST00000551634 RPS6KA1Q15418 735 aa25.92■■□□□ 1.74
NPAS3-211ENST00000551634 GPATCH4Q5T3I0 446 aaKnown RBP25.92■■□□□ 1.74
NPAS3-211ENST00000551634 SRRM3A6NNA2 597 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-211ENST00000551634 HMGB1P1B2RPK0 211 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-211ENST00000551634 ANXA13P27216 316 aa25.92■■□□□ 1.74
NPAS3-211ENST00000551634 SH2D3CQ8N5H7 860 aa25.92■■□□□ 1.74
NPAS3-211ENST00000551634 ISCUQ9H1K1 167 aa25.92■■□□□ 1.74
NPAS3-211ENST00000551634 TAF1DQ9H5J8 278 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-211ENST00000551634 ATF5Q9Y2D1 282 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-211ENST00000551634 AKR1B1P15121 316 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 USP11P51784 963 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 PAGR1Q9BTK6 254 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 PACSIN1Q9BY11 444 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 PSTPIP2Q9H939 334 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 GGA1Q9UJY5 639 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 MYO3BQ8WXR4 1341 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 ZBTB5O15062 677 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 RAD51CO43502 376 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 ARID5AQ03989 594 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 KCTD16Q68DU8 428 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 TTC19Q6DKK2 380 aaPredicted RBP25.91■■□□□ 1.74
NPAS3-211ENST00000551634 FRMD5Q7Z6J6 570 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 CNBD1Q8NA66 436 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 CALR3Q96L12 384 aaKnown RBP25.91■■□□□ 1.74
NPAS3-211ENST00000551634 ATP6V1G3Q96LB4 118 aa25.91■■□□□ 1.74
NPAS3-211ENST00000551634 DNA2P51530 1060 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 LRIG3Q6UXM1 1119 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 IRF2BP2Q7Z5L9 587 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 EPN3Q9H201 632 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 NR1D1P20393 614 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 GUCY2FP51841 1108 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 CUL1Q13616 776 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 DPP8Q6V1X1 898 aaPredicted RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms