RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 MOXD2PA6NHM9 499 aa8.11□□□□□ -1.11
FGD6-205ENST00000549499 CDC27P30260 824 aa8.11□□□□□ -1.11
FGD6-205ENST00000549499 AKAP17AQ02040 695 aaKnown RBP8.11□□□□□ -1.11
FGD6-205ENST00000549499 PGM5Q15124 567 aa8.11□□□□□ -1.11
FGD6-205ENST00000549499 TMEM132AQ24JP5 1023 aa8.11□□□□□ -1.11
FGD6-205ENST00000549499 HERC6Q8IVU3 1022 aa8.11□□□□□ -1.11
FGD6-205ENST00000549499 TRMT44Q8IYL2 757 aaKnown RBP8.11□□□□□ -1.11
FGD6-205ENST00000549499 GMCL1P1Q8NEA9 526 aa8.11□□□□□ -1.11
FGD6-205ENST00000549499 DHX38Q92620 1227 aaKnown RBP8.11□□□□□ -1.11
FGD6-205ENST00000549499 NLRP4Q96MN2 994 aa8.11□□□□□ -1.11
FGD6-205ENST00000549499 MTIF3Q9H2K0 278 aaKnown RBP8.11□□□□□ -1.11
FGD6-205ENST00000549499 THEGQ9P2T0 379 aa8.11□□□□□ -1.11
FGD6-205ENST00000549499 ZNF646O15015 1829 aaPredicted RBP8.11□□□□□ -1.11
FGD6-205ENST00000549499 COL11A1P12107 1806 aaPredicted RBP8.11□□□□□ -1.11
FGD6-205ENST00000549499 ARAP2Q8WZ64 1704 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 DSPP15924 2871 aaKnown RBP8.1□□□□□ -1.11
FGD6-205ENST00000549499 SMCO2A6NFE2 343 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 CPLX1O14810 134 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 LGALS2P05162 132 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 SMIM10L2AP0DMW4 78 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 SMIM10L2BP0DMW5 78 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 INSRRP14616 1297 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 NCLP19338 710 aaKnown RBP8.1□□□□□ -1.11
FGD6-205ENST00000549499 NDUFV1P49821 464 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 TAP1Q03518 808 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 ARHGAP1Q07960 439 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 Q6ZUG5 572 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 MKL1Q969V6 931 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 KATNBL1Q9H079 304 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 CTNNA3Q9UI47 895 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 SLC27A2O14975 620 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 SRGAP2CP0DJJ0 459 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 HARSP12081 509 aaKnown RBP8.1□□□□□ -1.11
FGD6-205ENST00000549499 PPFIA1Q13136 1202 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 MYSM1Q5VVJ2 828 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 CCSAPQ6IQ19 270 aaPredicted RBP8.1□□□□□ -1.11
FGD6-205ENST00000549499 MAMDC4Q6UXC1 1216 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 SMC5Q8IY18 1101 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 LMBR1Q8WVP7 490 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 RANBP17Q9H2T7 1088 aaKnown RBP8.1□□□□□ -1.11
FGD6-205ENST00000549499 HES2Q9Y543 173 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 FAM205CA6NFA0 338 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 MEIS3P2A8K0S8 358 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 GRM6O15303 877 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 SIPA1L1O43166 1804 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 MGAMO43451 1857 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 ITGB5P18084 799 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 METAP2P50579 478 aaKnown RBP eCLIP8.1□□□□□ -1.11
FGD6-205ENST00000549499 MTMR1Q13613 665 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 IKBKEQ14164 716 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 DDX60LQ5H9U9 1706 aaKnown RBP8.1□□□□□ -1.11
FGD6-205ENST00000549499 DOCK6Q96HP0 2047 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 KRT23Q9C075 422 aa8.1□□□□□ -1.11
FGD6-205ENST00000549499 ACACAQ13085 2346 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 CLSTN1O94985 981 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.11
FGD6-205ENST00000549499 DRP2Q13474 957 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 MTERF2Q49AM1 385 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 GPATCH4Q5T3I0 446 aaKnown RBP8.09□□□□□ -1.11
FGD6-205ENST00000549499 PLPP4Q5VZY2 271 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 NLRX1Q86UT6 975 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 DCAF4Q8WV16 495 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 ATAD5Q96QE3 1844 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 RAD50Q92878 1312 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 ASGR2P07307 311 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 CDC25AP30304 524 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 PDXDC2PQ6P474 469 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 TMEM130Q8N3G9 435 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 RUFY2Q8WXA3 655 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 AZI2Q9H6S1 392 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 PRG3Q9Y2Y8 225 aaPredicted RBP8.09□□□□□ -1.11
FGD6-205ENST00000549499 SPTA1P02549 2419 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 ALPK3Q96L96 1907 aa8.09□□□□□ -1.11
FGD6-205ENST00000549499 LETM2Q2VYF4 491 aa8.09□□□□□ -1.12
FGD6-205ENST00000549499 TCEAL5Q5H9L2 206 aa8.09□□□□□ -1.12
FGD6-205ENST00000549499 PLA2G4FQ68DD2 849 aa8.09□□□□□ -1.12
FGD6-205ENST00000549499 ALYREFQ86V81 257 aaKnown RBP8.09□□□□□ -1.12
FGD6-205ENST00000549499 RPUSD2Q8IZ73 545 aaKnown RBP8.09□□□□□ -1.12
FGD6-205ENST00000549499 PHOX2BQ99453 314 aa8.09□□□□□ -1.12
FGD6-205ENST00000549499 TUBE1Q9UJT0 475 aa8.09□□□□□ -1.12
FGD6-205ENST00000549499 TECTAO75443 2155 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 ZZEF1O43149 2961 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 C17orf102A2RUQ5 167 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 MEIS1O00470 390 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 NRIP1P48552 1158 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 AFF1P51825 1210 aaKnown RBP8.08□□□□□ -1.12
FGD6-205ENST00000549499 NPEPPSP55786 919 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 OSTNP61366 133 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 PPP1R18Q6NYC8 613 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 ABRAQ8N0Z2 381 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 BANK1Q8NDB2 785 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 MUTYHQ9UIF7 546 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 LRFN2Q9ULH4 789 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 PCDHA6Q9UN73 950 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 PCDHA8Q9Y5H6 950 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 SPTAN1Q13813 2472 aaKnown RBP8.08□□□□□ -1.12
FGD6-205ENST00000549499 THSD7BQ9C0I4 1608 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 ELP1O95163 1332 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 SYNGAP1Q96PV0 1343 aa8.08□□□□□ -1.12
FGD6-205ENST00000549499 DENND3A2RUS2 1198 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms