RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 GRXCR2A6NFK2 248 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 MEIS2O14770 477 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 NR3C2P08235 984 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 IFNAR1P17181 557 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 CHMP4BP1P59074 171 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 ARHGAP1Q07960 439 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 MBTPS1Q14703 1052 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 STXBP2Q15833 593 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 TRIM71Q2Q1W2 868 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 PTCRAQ6ISU1 281 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 HEATR3Q7Z4Q2 680 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 TEX2Q8IWB9 1127 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 SMARCC2Q8TAQ2 1214 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 NEK9Q8TD19 979 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 PDCD2LQ9BRP1 358 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 RNF26Q9BY78 433 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 PSTPIP2Q9H939 334 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 GTF2IRD1Q9UHL9 959 aa18.03■□□□□ 0.48
CHMP1A-206ENST00000549139 ALADP13716 330 aa18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 EIF2AK2P19525 551 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 RBM25P49756 843 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 NEK4P51957 841 aa18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 AK2P54819 239 aa18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 PFKFB3Q16875 520 aaPredicted RBP18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 WWC2Q6AWC2 1192 aa18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 FCHSD1Q86WN1 690 aa18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 GPKOWQ92917 476 aaPredicted RBP eCLIP18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 C17orf80Q9BSJ5 609 aa18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 C22orf23Q9BZE7 217 aa18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 NCOA5Q9HCD5 579 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 BARHL2Q9NY43 387 aa18.02■□□□□ 0.48
CHMP1A-206ENST00000549139 CACNA1HO95180 2353 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 C5orf42Q9H799 3197 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 POTEB3A0JP26 581 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 EFCAB14O75071 495 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 GH1P01241 217 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 SCG2P13521 617 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 MRE11P49959 708 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 AKAP17AQ02040 695 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 PGM5Q15124 567 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 PKN1Q16512 942 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 LY6KQ17RY6 165 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 PPP1R18Q6NYC8 613 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 USP17L6PQ6QN14 398 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 POTEBQ6S5H4 581 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 WNT8BQ93098 351 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 HDAC6Q9UBN7 1215 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 TPCN1Q9ULQ1 816 aa18.01■□□□□ 0.47
CHMP1A-206ENST00000549139 STXBP3O00186 592 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 SSTR3P32745 418 aaPredicted RBP18■□□□□ 0.47
CHMP1A-206ENST00000549139 NAPAP54920 295 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 HTRA4P83105 476 aaPredicted RBP18■□□□□ 0.47
CHMP1A-206ENST00000549139 STK3Q13188 491 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 PTK7Q13308 1070 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 IKBKEQ14164 716 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 TYW1BQ6NUM6 668 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 FAM117BQ6P1L5 589 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 CPLX2Q6PUV4 134 aaKnown RBP18■□□□□ 0.47
CHMP1A-206ENST00000549139 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18■□□□□ 0.471e-10■■□□□ 13.8
CHMP1A-206ENST00000549139 VSIG10LQ86VR7 867 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 SP7Q8TDD2 431 aaPredicted RBP18■□□□□ 0.47
CHMP1A-206ENST00000549139 PHKBQ93100 1093 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 MRPL38Q96DV4 380 aaKnown RBP18■□□□□ 0.47
CHMP1A-206ENST00000549139 GLT8D2Q9H1C3 349 aa18■□□□□ 0.47
CHMP1A-206ENST00000549139 SLKQ9H2G2 1235 aaPredicted RBP18■□□□□ 0.47
CHMP1A-206ENST00000549139 ZDBF2Q9HCK1 2354 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 FRMPD4Q14CM0 1322 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 TECTAO75443 2155 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 HAS3O00219 553 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 CPLX1O14810 134 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 PFKFB2O60825 505 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 MYCLP12524 364 aaPredicted RBP17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 NHLH1Q02575 133 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 SSRP1Q08945 709 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 SCRN1Q12765 414 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 COL19A1Q14993 1142 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 PUS10Q3MIT2 529 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 ZNF618Q5T7W0 954 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 FBXO22Q8NEZ5 403 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 EMID1Q96A84 441 aaPredicted RBP17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 KIF2CQ99661 725 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 SLC26A6Q9BXS9 759 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 UPF2Q9HAU5 1272 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 RIC8AQ9NPQ8 531 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 INSL6Q9Y581 213 aa17.99■□□□□ 0.47
CHMP1A-206ENST00000549139 SMCO2A6NFE2 343 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 DCXO43602 365 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 STAM2O75886 525 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 CCND2P30279 289 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 PSEN2P49810 448 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 HIC1Q14526 733 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 DGKDQ16760 1214 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 SEPT14Q6ZU15 432 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 TRIM22Q8IYM9 498 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 CCDC12Q8WUD4 166 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 FBXL18Q96ME1 805 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 UIMC1Q96RL1 719 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 KCNH6Q9H252 994 aa17.98■□□□□ 0.47
CHMP1A-206ENST00000549139 DDX41Q9UJV9 622 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms