RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 POLR3GO15318 223 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-209ENST00000547018 MIIPQ5JXC2 388 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 WDR59Q6PJI9 974 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 NEK11Q8NG66 645 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 VCPKMTQ9H867 229 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 EIF4A3P38919 411 aaKnown RBP14.07□□□□□ -0.16
SCAF11-209ENST00000547018 CASP4P49662 377 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 USP11P51784 963 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 GRIPAP1Q4V328 841 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 ANKRD7Q92527 254 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 ELMO3Q96BJ8 720 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 CGNQ9P2M7 1197 aaKnown RBP14.07□□□□□ -0.16
SCAF11-209ENST00000547018 CNOT7Q9UIV1 285 aaKnown RBP14.07□□□□□ -0.16
SCAF11-209ENST00000547018 TMX2Q9Y320 296 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 RBAK-RBAKDNI3L0D1 243 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 NT5C2P49902 561 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 CENPPQ6IPU0 288 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 PPP1R18Q6NYC8 613 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 SLFN12Q8IYM2 578 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 SCFD1Q8WVM8 642 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 JAKMIP2Q96AA8 810 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 GMCL1Q96IK5 515 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 WDR11Q9BZH6 1224 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 MLXIPQ9HAP2 919 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 SMARCAL1Q9NZC9 954 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 CEP350Q5VT06 3117 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 ZNF507Q8TCN5 953 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 WNK4Q96J92 1243 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 PCIF1Q9H4Z3 704 aa14.06□□□□□ -0.16
SCAF11-209ENST00000547018 REXO2Q9Y3B8 237 aaKnown RBP14.06□□□□□ -0.16
SCAF11-209ENST00000547018 GOLGA6L9A6NEM1 432 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 ZNF185O15231 689 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 ASNSP08243 561 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 SPATA31C1P0DKV0 1188 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 CLCN6P51797 869 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 FKBP3Q00688 224 aaKnown RBP14.05□□□□□ -0.16
SCAF11-209ENST00000547018 GFPT1Q06210 699 aaPredicted RBP14.05□□□□□ -0.16
SCAF11-209ENST00000547018 COG2Q14746 738 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 SYCP3Q8IZU3 236 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 GUF1Q8N442 669 aaKnown RBP14.05□□□□□ -0.16
SCAF11-209ENST00000547018 MTMR8Q96EF0 704 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 DEFB129Q9H1M3 183 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 KCNMB3Q9NPA1 279 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 SEPT11Q9NVA2 429 aaKnown RBP14.05□□□□□ -0.16
SCAF11-209ENST00000547018 PHLPP2Q6ZVD8 1323 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 RASSF10A6NK89 507 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 MYL1P05976 194 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 TMEM119Q4V9L6 283 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 LENG9Q96B70 501 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 HACL1Q9UJ83 578 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 COL4A3BPQ9Y5P4 624 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 DLEC1Q9Y238 1755 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 CNTNAP1P78357 1384 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 PVALEFA0A1B0GWK0 134 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 TMCO5BA8MYB1 307 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 MAN2A1Q16706 1144 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 CT47A1Q5JQC4 288 aaPredicted RBP14.05□□□□□ -0.16
SCAF11-209ENST00000547018 GJB7Q6PEY0 223 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 GMCL1P1Q8NEA9 526 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 ETNPPLQ8TBG4 499 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 WRNIP1Q96S55 665 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 MAGEF1Q9HAY2 307 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 ZHX2Q9Y6X8 837 aa14.05□□□□□ -0.16
SCAF11-209ENST00000547018 KDM3AQ9Y4C1 1321 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 TISP43B9A030 160 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 CETN3O15182 167 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 HMGCS2P54868 508 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 CHMP4BP1P59074 171 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 AP3B2Q13367 1082 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 MUM1L1Q5H9M0 696 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 ARHGAP27Q6ZUM4 889 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 FAM133AQ8N9E0 248 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 L2HGDHQ9H9P8 463 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 CAPN11Q9UMQ6 739 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 MYO3BQ8WXR4 1341 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 MYH10P35580 1976 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 IPO5O00410 1097 aaKnown RBP14.04□□□□□ -0.16
SCAF11-209ENST00000547018 FOSP01100 380 aaPredicted RBP14.04□□□□□ -0.16
SCAF11-209ENST00000547018 CYLC1P35663 651 aaPredicted RBP14.04□□□□□ -0.16
SCAF11-209ENST00000547018 SREBF1P36956 1147 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 TMCO3Q6UWJ1 677 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 MTERF4Q7Z6M4 381 aaKnown RBP14.04□□□□□ -0.16
SCAF11-209ENST00000547018 GMLQ99445 158 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 NAPGQ99747 312 aaPredicted RBP14.04□□□□□ -0.16
SCAF11-209ENST00000547018 NAA15Q9BXJ9 866 aaKnown RBP14.04□□□□□ -0.16
SCAF11-209ENST00000547018 IFIH1Q9BYX4 1025 aaKnown RBP14.04□□□□□ -0.16
SCAF11-209ENST00000547018 SUGCTQ9HAC7 445 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 COL20A1Q9P218 1284 aa14.04□□□□□ -0.16
SCAF11-209ENST00000547018 USO1O60763 962 aaKnown RBP14.03□□□□□ -0.16
SCAF11-209ENST00000547018 MOCS3O95396 460 aa14.03□□□□□ -0.16
SCAF11-209ENST00000547018 ATP1A1P05023 1023 aaKnown RBP14.03□□□□□ -0.16
SCAF11-209ENST00000547018 SLC9A1P19634 815 aa14.03□□□□□ -0.16
SCAF11-209ENST00000547018 HERVK_113P62684 666 aa14.03□□□□□ -0.16
SCAF11-209ENST00000547018 CEP55Q53EZ4 464 aa14.03□□□□□ -0.16
SCAF11-209ENST00000547018 ANGEL2Q5VTE6 544 aaKnown RBP14.03□□□□□ -0.16
SCAF11-209ENST00000547018 SPAG5Q96R06 1193 aa14.03□□□□□ -0.16
SCAF11-209ENST00000547018 GOLPH3Q9H4A6 298 aa14.03□□□□□ -0.16
SCAF11-209ENST00000547018 EHD2Q9NZN4 543 aa14.03□□□□□ -0.16
SCAF11-209ENST00000547018 MRPL11Q9Y3B7 192 aaKnown RBP14.03□□□□□ -0.16
SCAF11-209ENST00000547018 MORC2Q9Y6X9 1032 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms