RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 CTTNQ14247 550 aaKnown RBP16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 COG2Q14746 738 aa16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 TKFCQ3LXA3 575 aa16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 LRRC55Q6ZSA7 311 aa16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 CREBRFQ8IUR6 639 aa16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 CCDC51Q96ER9 411 aa16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 HOMER2Q9NSB8 354 aa16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 ZNF214Q9UL59 606 aaPredicted RBP16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 RIPK3Q9Y572 518 aa16.94■□□□□ 0.3
CALCOCO1-203ENST00000546443 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 IPO5O00410 1097 aaKnown RBP16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 ATP2A1O14983 1001 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 FXR1P51114 621 aaKnown RBP eCLIP16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 MAP3K9P80192 1104 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 PGM5Q15124 567 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 MIIPQ5JXC2 388 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 RNF207Q6ZRF8 634 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 AGO4Q9HCK5 861 aaKnown RBP16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 RNF146Q9NTX7 359 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 TMOD4Q9NZQ9 345 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 MYPNQ86TC9 1320 aa16.93■□□□□ 0.3
CALCOCO1-203ENST00000546443 DHX15O43143 795 aaKnown RBP16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 CCP110O43303 1012 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 CHMP2AO43633 222 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 KRT18P05783 430 aaKnown RBP16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 CASP14P31944 242 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 HERC4Q5GLZ8 1057 aaPredicted RBP16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 C9orf131Q5VYM1 1079 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 DLK2Q6UY11 383 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 CNGA4Q8IV77 575 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 REXO1L1PQ8IX06 675 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 ZC3H3Q8IXZ2 948 aaKnown RBP16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 NEK9Q8TD19 979 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 SCFD1Q8WVM8 642 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 TSG101Q99816 390 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 PDCD2LQ9BRP1 358 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 RUSC1Q9BVN2 902 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 NAA15Q9BXJ9 866 aaKnown RBP16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 BHMT2Q9H2M3 363 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 PXMP2Q9NR77 195 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 KCNH7Q9NS40 1196 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 LCTP09848 1927 aa16.92■□□□□ 0.3
CALCOCO1-203ENST00000546443 B4DLN1 442 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 ADM5C9JUS6 153 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 RNF225M0QZC1 329 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 TPM2P07951 284 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 MTIF2P46199 727 aaKnown RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 PRKG1Q13976 671 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 VGLL4Q14135 290 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 TMEM132BQ14DG7 1078 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 RINT1Q6NUQ1 792 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 TPH2Q8IWU9 490 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 CPLX3Q8WVH0 158 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 KCTD10Q9H3F6 313 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 TBC1D7Q9P0N9 293 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 WRAP73Q9P2S5 460 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 NKRFO15226 690 aaKnown RBP eCLIP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 TPM1P09493 284 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 PRKCSHP14314 528 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 EIF2AK2P19525 551 aaKnown RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 RAD51AP2Q09MP3 1159 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 ITGB3BPQ13352 177 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 BAATQ14032 418 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 C1orf186Q6ZWK4 172 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 SFR1Q86XK3 245 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 MYRIPQ8NFW9 859 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 RBM46Q8TBY0 533 aaKnown RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 MAF1Q9H063 256 aa16.91■□□□□ 0.3
CALCOCO1-203ENST00000546443 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 SPDYE16A6NNV3 312 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 KIF2AO00139 706 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 KIF20AO95235 890 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 MAN2A1Q16706 1144 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 SNRNP48Q6IEG0 339 aaKnown RBP16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 XRRA1Q6P2D8 792 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 NSMFQ6X4W1 530 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 SULF1Q8IWU6 871 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 PIGOQ8TEQ8 1089 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 CEP63Q96MT8 703 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 NACC1Q96RE7 527 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 ERGIC2Q96RQ1 377 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 RMDN3Q96TC7 470 aa16.9■□□□□ 0.3
CALCOCO1-203ENST00000546443 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
CALCOCO1-203ENST00000546443 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
CALCOCO1-203ENST00000546443 GAP43P17677 238 aa16.89■□□□□ 0.29
CALCOCO1-203ENST00000546443 CASP5P51878 434 aa16.89■□□□□ 0.29
CALCOCO1-203ENST00000546443 FKBP3Q00688 224 aaKnown RBP16.89■□□□□ 0.29
CALCOCO1-203ENST00000546443 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.29
CALCOCO1-203ENST00000546443 MTMR1Q13613 665 aa16.89■□□□□ 0.29
CALCOCO1-203ENST00000546443 BMT2Q1RMZ1 405 aa16.89■□□□□ 0.29
CALCOCO1-203ENST00000546443 VWA3BQ502W6 1294 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms