RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 OPHN1O60890 802 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 SCNN1DP51172 638 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 UBE2SQ16763 222 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 ERFEQ4G0M1 354 aa13.24□□□□□ -0.29
NPC1L1-204ENST00000546276 PODXLO00592 558 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 PPP2R2AP63151 447 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 KCNB1Q14721 858 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 HLFQ16534 295 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 GEN1Q17RS7 908 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 CFAP57Q96MR6 1250 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 CHP1Q99653 195 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 UBE2TQ9NPD8 197 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 SNX12Q9UMY4 172 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 PTPRMP28827 1452 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 AP5Z1O43299 807 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 SMIM24O75264 130 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 MAGOHP61326 146 aaKnown RBP13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 SCYL3Q8IZE3 742 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 JDP2Q8WYK2 163 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 ACCSQ96QU6 501 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 TAF1DQ9H5J8 278 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 NOP53Q9NZM5 478 aaKnown RBP13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 GMNNO75496 209 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 PRPF6O94906 941 aaKnown RBP13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 PSMD6Q15008 389 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 RASIP1Q5U651 963 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 NUGGCQ68CJ6 796 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 GDAP1Q8TB36 358 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 NUF2Q9BZD4 464 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 TRIM66O15016 1216 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 H2AFXP16104 143 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 LLGL1Q15334 1064 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 TXNRD1Q16881 649 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 MUM1L1Q5H9M0 696 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 PIGBQ92521 554 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 PARVGQ9HBI0 331 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 SNX24Q9Y343 169 aa13.23□□□□□ -0.29
NPC1L1-204ENST00000546276 TESPA1A2RU30 521 aaPredicted RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 ZBTB22O15209 634 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 DPYDQ12882 1025 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 KRT81Q14533 505 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 REXO1L1PQ8IX06 675 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 PNMA6FA0A0J9YX94 578 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 INHBAP08476 426 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 YWHAGP61981 247 aaKnown RBP eCLIP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 GUF1Q8N442 669 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 TAB3Q8N5C8 712 aaPredicted RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 RAD54LQ92698 747 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 HVCN1Q96D96 273 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 LRRC1Q9BTT6 524 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 MXD3Q9BW11 206 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 PP2D1A8MPX8 630 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 CYP2D6P10635 497 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 RBBP5Q15291 538 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 HNRNPLLQ8WVV9 542 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 PICK1Q9NRD5 415 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 BSDC1Q9NW68 430 aaPredicted RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 SERPINB13Q9UIV8 391 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 TPX2Q9ULW0 747 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 POTEMA6NI47 508 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 SGK1O00141 431 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 CDK8P49336 464 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 PPP2R5DQ14738 602 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
NPC1L1-204ENST00000546276 P4HA1P13674 534 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 PLA2G4AP47712 749 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 ORC2Q13416 577 aaPredicted RBP13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 DIXDC1Q155Q3 683 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 BEND6Q5SZJ8 279 aaPredicted RBP13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 BSPRYQ5W0U4 402 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 CCNI2Q6ZMN8 369 aaPredicted RBP13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 GABPB2Q8TAK5 448 aaPredicted RBP13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 FBXO41Q8TF61 875 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 Q9H521 79 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 SYNGAP1Q96PV0 1343 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 EXOC1LA0A1B0GW35 172 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms