RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 STXBP3O00186 592 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 ARHGAP4P98171 946 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 AP3B2Q13367 1082 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 MBTPS1Q14703 1052 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 GLG1Q92896 1179 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 BRF1Q92994 677 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 MXRA8Q9BRK3 442 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 COL25A1Q9BXS0 654 aaPredicted RBP22.73■■□□□ 1.23
CHD4-213ENST00000545584 ANO3Q9BYT9 981 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 ERAP1Q9NZ08 941 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 NRCAMQ92823 1304 aa22.73■■□□□ 1.23
CHD4-213ENST00000545584 ADD1P35611 737 aaKnown RBP22.72■■□□□ 1.23
CHD4-213ENST00000545584 LMBR1Q8WVP7 490 aa22.72■■□□□ 1.23
CHD4-213ENST00000545584 PGBD1Q96JS3 809 aa22.72■■□□□ 1.23
CHD4-213ENST00000545584 SDF4Q9BRK5 362 aa22.72■■□□□ 1.23
CHD4-213ENST00000545584 SMARCAD1Q9H4L7 1026 aa22.72■■□□□ 1.23
CHD4-213ENST00000545584 JPH1Q9HDC5 661 aaPredicted RBP22.72■■□□□ 1.23
CHD4-213ENST00000545584 GSTTP1A0A1W2PQM5 241 aa22.71■■□□□ 1.23
CHD4-213ENST00000545584 RPS6KB1P23443 525 aa22.71■■□□□ 1.23
CHD4-213ENST00000545584 ZNF76P36508 570 aa22.71■■□□□ 1.23
CHD4-213ENST00000545584 DEFB103AP81534 67 aa22.71■■□□□ 1.23
CHD4-213ENST00000545584 TAP1Q03518 808 aa22.71■■□□□ 1.23
CHD4-213ENST00000545584 CCDC85BQ15834 202 aaPredicted RBP22.71■■□□□ 1.23
CHD4-213ENST00000545584 PFKFB3Q16875 520 aaPredicted RBP22.71■■□□□ 1.23
CHD4-213ENST00000545584 CERS4Q9HA82 394 aa22.71■■□□□ 1.23
CHD4-213ENST00000545584 KCNH7Q9NS40 1196 aa22.71■■□□□ 1.23
CHD4-213ENST00000545584 A0A0C4DFX4 3053 aa22.71■■□□□ 1.23
CHD4-213ENST00000545584 KAT6AQ92794 2004 aa22.7■■□□□ 1.23
CHD4-213ENST00000545584 GTPBP6O43824 516 aaPredicted RBP22.7■■□□□ 1.22
CHD4-213ENST00000545584 CTSHP09668 335 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 SCG2P13521 617 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 AKAP17AQ02040 695 aaKnown RBP22.7■■□□□ 1.22
CHD4-213ENST00000545584 PPFIA1Q13136 1202 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 CEP55Q53EZ4 464 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 FBXL16Q8N461 479 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 DBF4BQ8NFT6 615 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 CCDC12Q8WUD4 166 aaPredicted RBP22.7■■□□□ 1.22
CHD4-213ENST00000545584 ARNTL2Q8WYA1 636 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 SEPT8Q92599 483 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 TNPO1Q92973 898 aaKnown RBP22.7■■□□□ 1.22
CHD4-213ENST00000545584 SLC9A2Q9UBY0 812 aa22.7■■□□□ 1.22
CHD4-213ENST00000545584 EPB41L2O43491 1005 aaKnown RBP22.69■■□□□ 1.22
CHD4-213ENST00000545584 GJB5O95377 273 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 AMHP03971 560 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 MARK3P27448 753 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 SREBF1P36956 1147 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 TCTN1Q2MV58 587 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 PLEKHG4Q58EX7 1191 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 TAF2Q6P1X5 1199 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 TMCO2Q7Z6W1 182 aaPredicted RBP22.69■■□□□ 1.22
CHD4-213ENST00000545584 SYMPKQ92797 1274 aaKnown RBP22.69■■□□□ 1.22
CHD4-213ENST00000545584 RAD9AQ99638 391 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 TSPYL2Q9H2G4 693 aaPredicted RBP22.69■■□□□ 1.22
CHD4-213ENST00000545584 AZI2Q9H6S1 392 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 TMEM260Q9NX78 707 aa22.69■■□□□ 1.22
CHD4-213ENST00000545584 NFASCO94856 1347 aa22.68■■□□□ 1.22
CHD4-213ENST00000545584 ADAM17P78536 824 aa22.68■■□□□ 1.22
CHD4-213ENST00000545584 MCTP2Q6DN12 878 aa22.68■■□□□ 1.22
CHD4-213ENST00000545584 RSPH3Q86UC2 560 aa22.68■■□□□ 1.22
CHD4-213ENST00000545584 MICALL1Q8N3F8 863 aa22.68■■□□□ 1.22
CHD4-213ENST00000545584 CYP2W1Q8TAV3 490 aa22.68■■□□□ 1.22
CHD4-213ENST00000545584 C6orf50Q9HD87 102 aa22.68■■□□□ 1.22
CHD4-213ENST00000545584 UNC80Q8N2C7 3258 aa22.68■■□□□ 1.22
CHD4-213ENST00000545584 CUL9Q8IWT3 2517 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 RFXAPO00287 272 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 PRPF3O43395 683 aaKnown RBP22.67■■□□□ 1.22
CHD4-213ENST00000545584 CLK2P49760 499 aaKnown RBP22.67■■□□□ 1.22
CHD4-213ENST00000545584 GRIK4Q16099 956 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 JAKMIP3Q5VZ66 844 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 FAM117BQ6P1L5 589 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 MYOCDQ8IZQ8 938 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 AGXT2Q9BYV1 514 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 THEGQ9P2T0 379 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 CHD9Q3L8U1 2897 aa22.67■■□□□ 1.22
CHD4-213ENST00000545584 NID2Q14112 1375 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 EYSQ5T1H1 3165 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 ESYT2A0FGR8 921 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 MEIS1O00470 390 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 ARP10275 920 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 GNA11P29992 359 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 TJAP1Q5JTD0 557 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 FAM26DQ5JW98 314 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.66■■□□□ 1.22
CHD4-213ENST00000545584 NIPA1Q7RTP0 329 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 APBB2Q92870 758 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 ZMYND12Q9H0C1 365 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 AGO4Q9HCK5 861 aaKnown RBP22.66■■□□□ 1.22
CHD4-213ENST00000545584 PRDM6Q9NQX0 595 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 TUBE1Q9UJT0 475 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 PTPRSQ13332 1948 aa22.66■■□□□ 1.22
CHD4-213ENST00000545584 LCHNA4D1U4 455 aa22.65■■□□□ 1.22
CHD4-213ENST00000545584 RRN3P2A6NIE6 340 aa22.65■■□□□ 1.22
CHD4-213ENST00000545584 ARHGEF15O94989 841 aa22.65■■□□□ 1.22
CHD4-213ENST00000545584 RPLP2P05387 115 aaKnown RBP22.65■■□□□ 1.22
CHD4-213ENST00000545584 POU3F3P20264 500 aaPredicted RBP22.65■■□□□ 1.22
CHD4-213ENST00000545584 ACTR2P61160 394 aa22.65■■□□□ 1.22
CHD4-213ENST00000545584 RPAINQ86UA6 219 aa22.65■■□□□ 1.22
CHD4-213ENST00000545584 ATXN2LQ8WWM7 1075 aaKnown RBP22.65■■□□□ 1.22
CHD4-213ENST00000545584 TRPC6Q9Y210 931 aa22.65■■□□□ 1.22
CHD4-213ENST00000545584 INSL6Q9Y581 213 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms