RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 USP17L12C9JPN9 530 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 USP17L21D6R901 530 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 KIF4AO95239 1232 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 SERPING1P05155 500 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 CALM1P0DP23 149 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 CALM2P0DP24 149 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 CALM3P0DP25 149 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 SLC5A1P13866 664 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 CHN1P15882 459 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 PEX19P40855 299 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 POLR2FP61218 127 aaKnown RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 DHX9Q08211 1270 aaKnown RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 BIRC2Q13490 618 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 COBLL1Q53SF7 1204 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 FAM133BQ5BKY9 247 aaKnown RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 TMED8Q6PL24 325 aaPredicted RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 CRELD2Q6UXH1 353 aaPredicted RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 RUFY4Q6ZNE9 571 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 DYMQ7RTS9 669 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 LRRC34Q8IZ02 419 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 SEC14L1Q92503 715 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 LRRC45Q96CN5 670 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 IQCDQ96DY2 449 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 FGFBP2Q9BYJ0 223 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 ABCF2Q9UG63 623 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 TRMT112Q9UI30 125 aaKnown RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 ASAP1Q9ULH1 1129 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 NOC2LQ9Y3T9 749 aaKnown RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 MROH5Q6ZUA9 1318 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 TAF1P21675 1872 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 CEP104O60308 925 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 PDE8AO60658 829 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
DDX47-212ENST00000545038 CYP2D6P10635 497 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 ALADP13716 330 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 TECP42680 631 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 ABL2P42684 1182 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 USP11P51784 963 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 IRX1P78414 480 aaPredicted RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 POU5F1Q01860 360 aaKnown RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 RIPK1Q13546 671 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 ZNF268Q14587 947 aaPredicted RBP8.68□□□□□ -1.02
DDX47-212ENST00000545038 SLC9C1Q4G0N8 1177 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 KIF6Q6ZMV9 814 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 FAM133AQ8N9E0 248 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 CCDC63Q8NA47 563 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 CCDC197Q8NCU1 140 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 ACTRT1Q8TDG2 376 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 PARD3BQ8TEW8 1205 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.68□□□□□ -1.02
DDX47-212ENST00000545038 P3H4Q92791 437 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 NLRP3Q96P20 1036 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 TRIM51Q9BSJ1 452 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 DPH5Q9H2P9 285 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 ARHGEF10LQ9HCE6 1279 aa8.68□□□□□ -1.02
DDX47-212ENST00000545038 CCDC194A0A1B0GVG4 234 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 EIF4E1BA6NMX2 242 aaKnown RBP8.67□□□□□ -1.02
DDX47-212ENST00000545038 DIAPH2O60879 1101 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 GCKP35557 465 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 ALDH5A1P51649 535 aaPredicted RBP8.67□□□□□ -1.02
DDX47-212ENST00000545038 IFI35P80217 286 aaPredicted RBP8.67□□□□□ -1.02
DDX47-212ENST00000545038 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 GRB10Q13322 594 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 SLC4A8Q2Y0W8 1093 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 SFMBT2Q5VUG0 894 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 MIS18BP1Q6P0N0 1132 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 CNNM4Q6P4Q7 775 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 ARMC9Q7Z3E5 817 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 KCNK18Q7Z418 384 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 TAX1BP1Q86VP1 789 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 RSRC1Q96IZ7 334 aaKnown RBP8.67□□□□□ -1.02
DDX47-212ENST00000545038 CPVLQ9H3G5 476 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 SLC5A4Q9NY91 659 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 CEP72Q9P209 647 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.67□□□□□ -1.02
DDX47-212ENST00000545038 THRAP3Q9Y2W1 955 aaKnown RBP8.67□□□□□ -1.02
DDX47-212ENST00000545038 KAT6BQ8WYB5 2073 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 CASZ1Q86V15 1759 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 AFF2P51816 1311 aa8.67□□□□□ -1.02
DDX47-212ENST00000545038 ENO4A6NNW6 628 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 KIF3CO14782 793 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 MAP3K13O43283 966 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 UBOX5O94941 541 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 MMEP08473 750 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 RARAP10276 462 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 CALML3P27482 149 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 COPB2P35606 906 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 NCALDP61601 193 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 PTK2Q05397 1052 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 RPS6KA1Q15418 735 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ZCWPW2Q504Y3 356 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 DPY19L2P1Q6NXN4 242 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 MAEAQ7L5Y9 396 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ERICH1Q86X53 443 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ZCRB1Q8TBF4 217 aaKnown RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 RNF25Q96BH1 459 aaPredicted RBP8.66□□□□□ -1.02
DDX47-212ENST00000545038 PNMA5Q96PV4 448 aa8.66□□□□□ -1.02
DDX47-212ENST00000545038 ELAC2Q9BQ52 826 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms