RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 PSAPP07602 524 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 ACLYP53396 1101 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 ACTR2P61160 394 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 ATP2C1P98194 919 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-221ENST00000544983 PDIA5Q14554 519 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 MIS18BP1Q6P0N0 1132 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 B3GNT9Q6UX72 402 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 C4orf32Q8N8J7 132 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 GLT1D1Q96MS3 346 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 MTG1Q9BT17 334 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-221ENST00000544983 AZI2Q9H6S1 392 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 TTC12Q9H892 705 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-221ENST00000544983 PKD2L1Q9P0L9 805 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 ZNF215Q9UL58 517 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-221ENST00000544983 PCDHA10Q9Y5I2 948 aa13.25□□□□□ -0.29
SNHG1-221ENST00000544983 EMSYQ7Z589 1322 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 POTEFA5A3E0 1075 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 WNT7AO00755 349 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 DKC1O60832 514 aaKnown RBP eCLIP13.24□□□□□ -0.293e-6■■■■□ 23.3
SNHG1-221ENST00000544983 LGR5O75473 907 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 ASGR1P07306 291 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
SNHG1-221ENST00000544983 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNHG1-221ENST00000544983 PURAQ00577 322 aaKnown RBP13.24□□□□□ -0.29
SNHG1-221ENST00000544983 BEX3Q00994 111 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 PKP1Q13835 747 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 FAM160B1Q5W0V3 765 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 ABHD15Q6UXT9 468 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 DTHD1Q6ZMT9 781 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 PLPPR4Q7Z2D5 763 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 NECAB2Q7Z6G3 386 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 SMARCAD1Q9H4L7 1026 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 DISC1Q9NRI5 854 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 CHMP5Q9NZZ3 219 aa13.24□□□□□ -0.29
SNHG1-221ENST00000544983 IGKV6D-21A0A0A0MT36 114 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 GSTTP1A0A1W2PQM5 241 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 MYADML2A6NDP7 307 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 YEATS4O95619 227 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 CCNE2O96020 404 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 F2P00734 622 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
SNHG1-221ENST00000544983 SUPT20HL2P0C7V6 817 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 TXKP42681 527 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 NASPP49321 788 aaPredicted RBP13.23□□□□□ -0.29
SNHG1-221ENST00000544983 SLC39A14Q15043 492 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 SF3A1Q15459 793 aaKnown RBP13.23□□□□□ -0.29
SNHG1-221ENST00000544983 MIER3Q7Z3K6 550 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 ERMNQ8TAM6 284 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 NEK9Q8TD19 979 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 AFAP1L1Q8TED9 768 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 ATP6V0A1Q93050 837 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 AK8Q96MA6 479 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 TMEM60Q9H2L4 133 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 BCAS3Q9H6U6 928 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 ERAP1Q9NZ08 941 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 VAV3Q9UKW4 847 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 ZDHHC9Q9Y397 364 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 SAMM50Q9Y512 469 aa13.23□□□□□ -0.29
SNHG1-221ENST00000544983 A0A1W2PQ45 241 aaPredicted RBP13.22□□□□□ -0.29
SNHG1-221ENST00000544983 A0A1W2PQY0 241 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 H3BRB1 525 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
SNHG1-221ENST00000544983 SLC26A4O43511 780 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 LGALS2P05162 132 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 MYL3P08590 195 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 COL6A1P12109 1028 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 EN2P19622 333 aaPredicted RBP13.22□□□□□ -0.29
SNHG1-221ENST00000544983 MUTP22033 750 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
SNHG1-221ENST00000544983 KRT85P78386 507 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 SP4Q02446 784 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 PTPN11Q06124 597 aaPredicted RBP13.22□□□□□ -0.29
SNHG1-221ENST00000544983 SPIRE1Q08AE8 756 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 NBR1Q14596 966 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 EPHA7Q15375 998 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 UBE2Q1Q7Z7E8 422 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 IGSF22Q8N9C0 903 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 GLG1Q92896 1179 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 UNC45AQ9H3U1 944 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
SNHG1-221ENST00000544983 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
SNHG1-221ENST00000544983 MROH7Q68CQ1 1323 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.29
SNHG1-221ENST00000544983 HAS3O00219 553 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 BACH1O14867 736 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 SORBS3O60504 671 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 P4HBP07237 508 aaKnown RBP13.21□□□□□ -0.29
SNHG1-221ENST00000544983 STAT5BP51692 787 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 PTPAQ15257 358 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 FOXD4L5Q5VV16 416 aaPredicted RBP13.21□□□□□ -0.29
SNHG1-221ENST00000544983 HAUS3Q68CZ6 603 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 NFRKBQ6P4R8 1299 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 CXCL17Q6UXB2 119 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 LINC00301Q8NCQ3 95 aa13.21□□□□□ -0.29
SNHG1-221ENST00000544983 FOXD4L4Q8WXT5 416 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms