RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 BTG3Q14201 252 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 CFAP157Q5JU67 520 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 BEND6Q5SZJ8 279 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 THEMIS2Q5TEJ8 643 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 EFCAB2Q5VUJ9 269 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 ADALQ6DHV7 355 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 WDR93Q6P2C0 686 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 CYB5D1Q6P9G0 228 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 HFE2Q6ZVN8 426 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 NCCRP1Q6ZVX7 275 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 CDC37L1Q7L3B6 337 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 CEP57L1Q8IYX8 460 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 SYT2Q8N9I0 419 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 TRIML1Q8N9V2 468 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 C1orf131Q8NDD1 294 aaKnown RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 SMARCC2Q8TAQ2 1214 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 MAIP1Q8WWC4 291 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 IL17RAQ96F46 866 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 BPIFA3Q9BQP9 254 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 SLC39A3Q9BRY0 314 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 TINF2Q9BSI4 451 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 OSBPL10Q9BXB5 764 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 TRIM5Q9C035 493 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 VCXQ9H320 206 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 CAPN10Q9HC96 672 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 CD248Q9HCU0 757 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 SRA1Q9HD15 236 aaKnown RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 DDX21Q9NR30 783 aaKnown RBP eCLIP4.79□□□□□ -1.641e-323■■■□□ 15.6
SNHG1-219ENST00000542112 WDR35Q9P2L0 1181 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 SEL1LQ9UBV2 794 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 FBXO9Q9UK97 447 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-219ENST00000542112 DSEQ9UL01 958 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 SLC6A14Q9UN76 642 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 CEP131Q9UPN4 1083 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 ZNF652Q9Y2D9 606 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 C15orf41Q9Y2V0 281 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 ASB3Q9Y575 518 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 N6AMT1Q9Y5N5 214 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 IFT172Q9UG01 1749 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 ADGRL1O94910 1474 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 PLA2R1Q13018 1463 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 POGZQ7Z3K3 1410 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 MYO5BQ9ULV0 1848 aa4.79□□□□□ -1.64
SNHG1-219ENST00000542112 USP47Q96K76 1375 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 UBN2Q6ZU65 1347 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 MLH3Q9UHC1 1453 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 A0A096LPE4 126 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 A0A1W2PPZ6 126 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CFAP73A6NFT4 308 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 LRRC10BA6NIK2 292 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 TRIM64CA6NLI5 447 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 J3QW42 95 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 BIN1O00499 593 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 VAMP4O75379 141 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CDC45O75419 566 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 GSTA1P08263 222 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 TOP1P11387 765 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ADH7P40394 386 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 GNAQP50148 359 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 IRAK1P51617 712 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 INHBCP55103 352 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 PCBP4P57723 403 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 RACK1P63244 317 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ATP11AP98196 1134 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 APBA1Q02410 837 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CBX3Q13185 183 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 SPCS2Q15005 226 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 WDR43Q15061 677 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 NONOQ15233 471 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ADRM1Q16186 407 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 MAP3K11Q16584 847 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 MUM1Q2TAK8 710 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 LACTB2Q53H82 288 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 NCAPH2Q6IBW4 605 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 RBM43Q6ZSC3 357 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ZNF365Q70YC5 407 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 NLRP9Q7RTR0 991 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 TMC6Q7Z403 805 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 PCGF5Q86SE9 256 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 FAM35AQ86V20 835 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 VPS37DQ86XT2 251 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 RELL1Q8IUW5 271 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CCDC13Q8IYE1 715 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CRACR2BQ8N4Y2 399 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 NSUN7Q8NE18 718 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 STKLD1Q8NE28 680 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CCDC110Q8TBZ0 833 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 BCAS4Q8TDM0 211 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ASAP3Q8TDY4 903 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CACTINQ8WUQ7 758 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CTNNBL1Q8WYA6 563 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 BSNDQ8WZ55 320 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 MAML1Q92585 1016 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 TAF4BQ92750 862 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ATP6V0A1Q93050 837 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 PLD4Q96BZ4 506 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 EVI5LQ96CN4 794 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 SCYL1Q96KG9 808 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 RPGRIP1Q96KN7 1286 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 SNX27Q96L92 541 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms