RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 Q6ZVU0 165 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 PDZD4Q76G19 769 aaPredicted RBP6.41□□□□□ -1.38
DDB1-219ENST00000541513 DDX53Q86TM3 631 aaKnown RBP6.41□□□□□ -1.38
DDB1-219ENST00000541513 NCAPG2Q86XI2 1143 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 PTRH1Q86Y79 214 aaKnown RBP6.41□□□□□ -1.38
DDB1-219ENST00000541513 C7orf61Q8IZ16 206 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 ZBTB34Q8NCN2 500 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 EHBP1Q8NDI1 1231 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 STK35Q8TDR2 534 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 DIS3LQ8TF46 1054 aaKnown RBP6.41□□□□□ -1.38
DDB1-219ENST00000541513 BTN2A2Q8WVV5 523 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 DIO2Q92813 273 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 HPS3Q969F9 1004 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 ZIC5Q96T25 663 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 NUDT16L1Q9BRJ7 211 aaKnown RBP6.41□□□□□ -1.38
DDB1-219ENST00000541513 C14orf119Q9NWQ9 140 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 SAMD15Q9P1V8 674 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 STK26Q9P289 416 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 GTPBP10A4D1E9 387 aaKnown RBP6.4□□□□□ -1.38
DDB1-219ENST00000541513 KLHL33A6NCF5 533 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 RRN3P2A6NIE6 340 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 B4E171 279 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 RNF223E7ERA6 249 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 DLX3O60479 287 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 GAS7O60861 476 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 DNAJA2O60884 412 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 TUSC2O75896 110 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 ARIH2O95376 493 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 SLC19A1P41440 591 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 KCNQ4P56696 695 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 NEXNQ0ZGT2 675 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 HYAL2Q12891 473 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 BLMHQ13867 455 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 LRRC32Q14392 662 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 PLA2G4EQ3MJ16 856 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 GPATCH4Q5T3I0 446 aaKnown RBP6.4□□□□□ -1.38
DDB1-219ENST00000541513 CCDC149Q6ZUS6 474 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 NEK10Q6ZWH5 1172 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 C11orf74Q86VG3 221 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 SNX32Q86XE0 403 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 KIAA0319LQ8IZA0 1049 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 NXPE1Q8N323 547 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 KCT2Q8NC54 265 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 LRRN4CLQ8ND94 238 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 ZSCAN18Q8TBC5 510 aaPredicted RBP6.4□□□□□ -1.38
DDB1-219ENST00000541513 ADAMTS18Q8TE60 1221 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 AIDAQ96BJ3 306 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 TEKT5Q96M29 485 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 TBCBQ99426 244 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 TREX2Q9BQ50 279 aaPredicted RBP6.4□□□□□ -1.38
DDB1-219ENST00000541513 CARD11Q9BXL7 1154 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 VPS11Q9H270 941 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.38
DDB1-219ENST00000541513 CD248Q9HCU0 757 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 GPRC5BQ9NZH0 403 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 POLHQ9Y253 713 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 INVSQ9Y283 1065 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 TLL2Q9Y6L7 1015 aa6.4□□□□□ -1.38
DDB1-219ENST00000541513 MSH6P52701 1360 aa6.4□□□□□ -1.39
DDB1-219ENST00000541513 PLEKHH1Q9ULM0 1364 aa6.4□□□□□ -1.39
DDB1-219ENST00000541513 ITSN1Q15811 1721 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 RGPD8O14715 1765 aaPredicted RBP6.39□□□□□ -1.39
DDB1-219ENST00000541513 A0A087WV62 115 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 SPATA31C2B4DYI2 1134 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 F5H0A9 414 aaPredicted RBP6.39□□□□□ -1.39
DDB1-219ENST00000541513 GLRX3O76003 335 aaKnown RBP6.39□□□□□ -1.39
DDB1-219ENST00000541513 TBC1D8O95759 1140 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 S1PR4O95977 384 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 CYP11A1P05108 521 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 EPHX1P07099 455 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 ELF1P32519 619 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 ICA1Q05084 483 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 MAP4K2Q12851 820 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 AP3B2Q13367 1082 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 IQCEQ6IPM2 695 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 DARS2Q6PI48 645 aaKnown RBP6.39□□□□□ -1.39
DDB1-219ENST00000541513 ADAMTSL4Q6UY14 1074 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 DSTYKQ6XUX3 929 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 CCDC129Q6ZRS4 1044 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 PDZD3Q86UT5 571 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 PPFIBP1Q86W92 1011 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 MAP4K3Q8IVH8 894 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 HSCBQ8IWL3 235 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 CENPIQ92674 756 aaPredicted RBP6.39□□□□□ -1.39
DDB1-219ENST00000541513 SMARCC1Q92922 1105 aaPredicted RBP6.39□□□□□ -1.39
DDB1-219ENST00000541513 FERMT2Q96AC1 680 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 MRGPRX3Q96LB0 322 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 DHRS1Q96LJ7 313 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 PRAM1Q96QH2 718 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 RMDN3Q96TC7 470 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 HAUS7Q99871 368 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 KLHL25Q9H0H3 589 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 C19orf44Q9H6X5 657 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 PRDM6Q9NQX0 595 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 MARK1Q9P0L2 795 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 POGKQ9P215 609 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 APEX2Q9UBZ4 518 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
DDB1-219ENST00000541513 CENPJQ9HC77 1338 aaPredicted RBP6.39□□□□□ -1.39
DDB1-219ENST00000541513 H3BML4 177 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms