RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 AIPL1Q9NZN9 384 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 CWC15Q9P013 229 aaKnown RBP10.53□□□□□ -0.72
CNOT4-212ENST00000541284 GOLGA6BA6NDN3 693 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 AKR1B10O60218 316 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 SERPING1P05155 500 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 TNNI2P48788 182 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 IRAK1P51617 712 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 CORO7P57737 925 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 FKBP3Q00688 224 aaKnown RBP10.53□□□□□ -0.72
CNOT4-212ENST00000541284 SEPT2Q15019 361 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 SHROOM1Q2M3G4 852 aaPredicted RBP10.53□□□□□ -0.72
CNOT4-212ENST00000541284 FAM26FQ5R3K3 315 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 CEP63Q96MT8 703 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 NLRC4Q9NPP4 1024 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 SMCHD1A6NHR9 2005 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 USP17L10C9JJH3 530 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 ECHS1P30084 290 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 RFC4P35249 363 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 TRADDQ15628 312 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 KRT79Q5XKE5 535 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 C10orf67Q8IYJ2 551 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 IQCKQ8N0W5 287 aa10.52□□□□□ -0.72
CNOT4-212ENST00000541284 AJAP1Q9UKB5 411 aaPredicted RBP10.52□□□□□ -0.72
CNOT4-212ENST00000541284 CYP3A7-CYP3A51PA0A087WV96 503 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 GRID2IPA4D2P6 1211 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 MED24O75448 989 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 PALMO75781 387 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 CYP3A7P24462 503 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 SLC16A2P36021 539 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 EPHB4P54760 987 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 IQCEQ6IPM2 695 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 EPM2AIP1Q7L775 607 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-212ENST00000541284 IRF2BP2Q7Z5L9 587 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 LENG9Q96B70 501 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 LSM14BQ9BX40 385 aaKnown RBP10.52□□□□□ -0.73
CNOT4-212ENST00000541284 BCAS3Q9H6U6 928 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 GGA1Q9UJY5 639 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 POTEB3A0JP26 581 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 POTECB2RU33 542 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 FGFR1OPO95684 399 aaKnown RBP10.52□□□□□ -0.73
CNOT4-212ENST00000541284 CARSP49589 748 aaKnown RBP10.52□□□□□ -0.73
CNOT4-212ENST00000541284 SKOR1P84550 965 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 CACNB1Q02641 598 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-212ENST00000541284 SLC18A3Q16572 532 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 EMBQ6PCB8 327 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 POTEBQ6S5H4 581 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 TSPYL1Q9H0U9 437 aa10.52□□□□□ -0.73
CNOT4-212ENST00000541284 ETNPPLQ8TBG4 499 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 ZIM3Q96PE6 472 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 NOX5Q96PH1 765 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 RASSF4Q9H2L5 321 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 TBC1D7Q9P0N9 293 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 ZNF233A6NK53 670 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 BTNL10A8MVZ5 291 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 ANKRD65E5RJM6 399 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 ZBTB5O15062 677 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 TTLL1O95922 423 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 PLA2G4BP0C869 781 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 KCNA3P22001 575 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 POLD1P28340 1107 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 STAT3P40763 770 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 POLR2FP61218 127 aaKnown RBP10.51□□□□□ -0.73
CNOT4-212ENST00000541284 NNTQ13423 1086 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 EMC10Q5UCC4 262 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 SIAH1Q8IUQ4 282 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 MREGQ8N565 214 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 RBM46Q8TBY0 533 aaKnown RBP10.51□□□□□ -0.73
CNOT4-212ENST00000541284 ALS2CR12Q96Q35 445 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 CRACR2AQ9BSW2 395 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 SIX2Q9NPC8 291 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 GOLGA6CA6NDK9 693 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 FTCDO95954 541 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 GOLGA6DP0CG33 693 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.731e-6■■■■□ 20.8
CNOT4-212ENST00000541284 GLE1Q53GS7 698 aaKnown RBP10.51□□□□□ -0.73
CNOT4-212ENST00000541284 SFMBT2Q5VUG0 894 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 LRRC57Q8N9N7 239 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 CASKIN2Q8WXE0 1202 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 CDK5RAP3Q96JB5 506 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 UIMC1Q96RL1 719 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 MXD3Q9BW11 206 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 DEF6Q9H4E7 631 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 GOLGA6AQ9NYA3 693 aa10.51□□□□□ -0.73
CNOT4-212ENST00000541284 PACSIN2Q9UNF0 486 aaPredicted RBP10.51□□□□□ -0.73
CNOT4-212ENST00000541284 TRAF5O00463 557 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 MEIS2O14770 477 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 SPATA31C1P0DKV0 1188 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 NOP2P46087 812 aaKnown RBP10.5□□□□□ -0.73
CNOT4-212ENST00000541284 PSMC6P62333 389 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 PICALMQ13492 652 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 STYK1Q6J9G0 422 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 ZFPM1Q8IX07 1006 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 NELFCDQ8IXH7 590 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 FAM76AQ8TAV0 307 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 TBC1D5Q92609 795 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 RBM17Q96I25 401 aaKnown RBP10.5□□□□□ -0.73
CNOT4-212ENST00000541284 SWAP70Q9UH65 585 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 KIAA1024Q9UPX6 916 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms